Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Limk1P53668 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Limk1P53668 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Limk1P53668 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Limk1P53668 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Limk1P53668 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.41■□□□□ 0.54
Limk1P53668 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Limk1P53668 Dio3-201ENSMUST00000097228 1449 ntBASIC18.41■□□□□ 0.54
Limk1P53668 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Limk1P53668 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.41■□□□□ 0.54
Limk1P53668 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Limk1P53668 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Limk1P53668 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Limk1P53668 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.41■□□□□ 0.54
Limk1P53668 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Limk1P53668 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Limk1P53668 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.41■□□□□ 0.54
Limk1P53668 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Limk1P53668 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Limk1P53668 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Limk1P53668 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Limk1P53668 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Limk1P53668 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Limk1P53668 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.4■□□□□ 0.54
Limk1P53668 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Limk1P53668 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Limk1P53668 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Limk1P53668 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Limk1P53668 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Limk1P53668 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Limk1P53668 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Limk1P53668 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.4■□□□□ 0.54
Limk1P53668 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Limk1P53668 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Limk1P53668 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.39■□□□□ 0.54
Limk1P53668 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Limk1P53668 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.39■□□□□ 0.53
Limk1P53668 Gm9987-201ENSMUST00000069768 567 ntBASIC18.39■□□□□ 0.53
Limk1P53668 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Limk1P53668 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk1P53668 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Limk1P53668 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk1P53668 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk1P53668 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk1P53668 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk1P53668 Mir1199-201ENSMUST00000117015 119 ntBASIC18.38■□□□□ 0.53
Limk1P53668 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.38■□□□□ 0.53
Limk1P53668 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Limk1P53668 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.38■□□□□ 0.53
Limk1P53668 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk1P53668 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Limk1P53668 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Limk1P53668 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Limk1P53668 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.38■□□□□ 0.53
Limk1P53668 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Limk1P53668 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Limk1P53668 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Limk1P53668 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.37■□□□□ 0.53
Limk1P53668 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Limk1P53668 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.37■□□□□ 0.53
Limk1P53668 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Limk1P53668 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Limk1P53668 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Limk1P53668 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Limk1P53668 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Limk1P53668 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Limk1P53668 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk1P53668 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk1P53668 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.36■□□□□ 0.53
Limk1P53668 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk1P53668 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk1P53668 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Limk1P53668 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.36■□□□□ 0.53
Limk1P53668 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.36■□□□□ 0.53
Limk1P53668 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.36■□□□□ 0.53
Limk1P53668 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk1P53668 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk1P53668 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Limk1P53668 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk1P53668 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk1P53668 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Limk1P53668 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Limk1P53668 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.35■□□□□ 0.53
Limk1P53668 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Limk1P53668 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk1P53668 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Limk1P53668 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk1P53668 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.35■□□□□ 0.53
Limk1P53668 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Limk1P53668 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Limk1P53668 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk1P53668 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk1P53668 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk1P53668 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Limk1P53668 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.35■□□□□ 0.53
Limk1P53668 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk1P53668 Gm10698-201ENSMUST00000182663 604 ntBASIC18.35■□□□□ 0.53
Limk1P53668 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Limk1P53668 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Limk1P53668 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms