Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nek1P51954 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nek1P51954 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nek1P51954 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nek1P51954 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nek1P51954 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.96■□□□□ 0.95
Nek1P51954 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Nek1P51954 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nek1P51954 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nek1P51954 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nek1P51954 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nek1P51954 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nek1P51954 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.95■□□□□ 0.94
Nek1P51954 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nek1P51954 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nek1P51954 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nek1P51954 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.95■□□□□ 0.94
Nek1P51954 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.95■□□□□ 0.94
Nek1P51954 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.95■□□□□ 0.94
Nek1P51954 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.95■□□□□ 0.94
Nek1P51954 Gm42642-201ENSMUST00000200683 355 ntBASIC20.95■□□□□ 0.94
Nek1P51954 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.95■□□□□ 0.94
Nek1P51954 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nek1P51954 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nek1P51954 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.94■□□□□ 0.94
Nek1P51954 Gm27405-201ENSMUST00000184201 112 ntBASIC20.94■□□□□ 0.94
Nek1P51954 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nek1P51954 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Nek1P51954 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.93■□□□□ 0.94
Nek1P51954 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.93■□□□□ 0.94
Nek1P51954 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nek1P51954 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nek1P51954 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nek1P51954 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nek1P51954 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
Nek1P51954 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nek1P51954 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nek1P51954 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.93■□□□□ 0.94
Nek1P51954 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nek1P51954 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nek1P51954 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nek1P51954 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.92■□□□□ 0.94
Nek1P51954 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nek1P51954 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nek1P51954 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nek1P51954 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Nek1P51954 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nek1P51954 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nek1P51954 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nek1P51954 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.92■□□□□ 0.94
Nek1P51954 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nek1P51954 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nek1P51954 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nek1P51954 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nek1P51954 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nek1P51954 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nek1P51954 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.91■□□□□ 0.94
Nek1P51954 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nek1P51954 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nek1P51954 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nek1P51954 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nek1P51954 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nek1P51954 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nek1P51954 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nek1P51954 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek1P51954 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Nek1P51954 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek1P51954 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nek1P51954 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nek1P51954 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nek1P51954 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek1P51954 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek1P51954 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek1P51954 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nek1P51954 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nek1P51954 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nek1P51954 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nek1P51954 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.94
Nek1P51954 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Nek1P51954 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.89■□□□□ 0.94
Nek1P51954 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.89■□□□□ 0.93
Nek1P51954 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek1P51954 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.89■□□□□ 0.93
Nek1P51954 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.89■□□□□ 0.93
Nek1P51954 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek1P51954 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nek1P51954 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.88■□□□□ 0.93
Nek1P51954 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.88■□□□□ 0.93
Nek1P51954 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.88■□□□□ 0.93
Nek1P51954 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms