Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr1P51675 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.54■□□□□ 0.88
Ccr1P51675 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr1P51675 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr1P51675 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr1P51675 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr1P51675 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccr1P51675 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccr1P51675 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ccr1P51675 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Ccr1P51675 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ccr1P51675 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccr1P51675 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccr1P51675 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.52■□□□□ 0.88
Ccr1P51675 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ccr1P51675 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.52■□□□□ 0.88
Ccr1P51675 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccr1P51675 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ccr1P51675 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccr1P51675 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccr1P51675 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ccr1P51675 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ccr1P51675 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.52■□□□□ 0.87
Ccr1P51675 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ccr1P51675 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.51■□□□□ 0.87
Ccr1P51675 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ccr1P51675 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1P51675 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.5■□□□□ 0.87
Ccr1P51675 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccr1P51675 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
Ccr1P51675 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccr1P51675 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ccr1P51675 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccr1P51675 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccr1P51675 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccr1P51675 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccr1P51675 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1P51675 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1P51675 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Ccr1P51675 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1P51675 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ccr1P51675 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Ccr1P51675 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1P51675 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1P51675 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.49■□□□□ 0.87
Ccr1P51675 Gm37856-201ENSMUST00000191634 999 ntBASIC20.49■□□□□ 0.87
Ccr1P51675 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1P51675 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1P51675 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1P51675 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Ccr1P51675 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ccr1P51675 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1P51675 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.49■□□□□ 0.87
Ccr1P51675 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ccr1P51675 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.48■□□□□ 0.87
Ccr1P51675 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.48■□□□□ 0.87
Ccr1P51675 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr1P51675 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ccr1P51675 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.48■□□□□ 0.87
Ccr1P51675 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.48■□□□□ 0.87
Ccr1P51675 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr1P51675 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr1P51675 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr1P51675 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr1P51675 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr1P51675 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ccr1P51675 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccr1P51675 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr1P51675 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr1P51675 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ccr1P51675 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr1P51675 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr1P51675 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.47■□□□□ 0.87
Ccr1P51675 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms