Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.43■□□□□ 0.22
GdnfP48540 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GdnfP48540 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.43■□□□□ 0.22
GdnfP48540 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.43■□□□□ 0.22
GdnfP48540 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GdnfP48540 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.43■□□□□ 0.22
GdnfP48540 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GdnfP48540 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
GdnfP48540 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.42■□□□□ 0.22
GdnfP48540 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.42■□□□□ 0.22
GdnfP48540 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GdnfP48540 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.42■□□□□ 0.22
GdnfP48540 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GdnfP48540 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GdnfP48540 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GdnfP48540 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GdnfP48540 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.42■□□□□ 0.22
GdnfP48540 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.42■□□□□ 0.22
GdnfP48540 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GdnfP48540 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GdnfP48540 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GdnfP48540 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GdnfP48540 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GdnfP48540 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.41■□□□□ 0.22
GdnfP48540 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
GdnfP48540 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.41■□□□□ 0.22
GdnfP48540 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.41■□□□□ 0.22
GdnfP48540 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GdnfP48540 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GdnfP48540 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GdnfP48540 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GdnfP48540 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GdnfP48540 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GdnfP48540 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GdnfP48540 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GdnfP48540 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GdnfP48540 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.4■□□□□ 0.22
GdnfP48540 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GdnfP48540 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GdnfP48540 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
GdnfP48540 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GdnfP48540 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GdnfP48540 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GdnfP48540 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GdnfP48540 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GdnfP48540 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GdnfP48540 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
GdnfP48540 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GdnfP48540 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GdnfP48540 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.4■□□□□ 0.22
GdnfP48540 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GdnfP48540 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GdnfP48540 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GdnfP48540 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GdnfP48540 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.39■□□□□ 0.21
GdnfP48540 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GdnfP48540 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GdnfP48540 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GdnfP48540 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GdnfP48540 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GdnfP48540 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GdnfP48540 Gm27454-201ENSMUST00000185090 204 ntBASIC16.38■□□□□ 0.21
GdnfP48540 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms