Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-2P42586 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-2P42586 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-2P42586 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx2-2P42586 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Golph3-205ENSMUST00000228671 2842 ntBASIC17.3■□□□□ 0.36
Nkx2-2P42586 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx2-2P42586 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Gm5874-201ENSMUST00000096101 508 ntBASIC17.29■□□□□ 0.36
Nkx2-2P42586 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-2P42586 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.28■□□□□ 0.36
Nkx2-2P42586 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-2P42586 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-2P42586 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.27■□□□□ 0.36
Nkx2-2P42586 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Gm10033-202ENSMUST00000211874 928 ntBASIC17.27■□□□□ 0.36
Nkx2-2P42586 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-2P42586 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.27■□□□□ 0.35
Nkx2-2P42586 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx2-2P42586 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Nkx2-2P42586 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Gm18284-201ENSMUST00000172604 624 ntBASIC17.26■□□□□ 0.35
Nkx2-2P42586 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-2P42586 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-2P42586 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms