Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.65■□□□□ 0.58
Cd9P40240 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd9P40240 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd9P40240 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd9P40240 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd9P40240 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd9P40240 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd9P40240 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cd9P40240 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cd9P40240 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cd9P40240 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cd9P40240 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd9P40240 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.64■□□□□ 0.57
Cd9P40240 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd9P40240 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd9P40240 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd9P40240 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.64■□□□□ 0.57
Cd9P40240 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.64■□□□□ 0.57
Cd9P40240 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd9P40240 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd9P40240 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd9P40240 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cd9P40240 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd9P40240 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd9P40240 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd9P40240 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.63■□□□□ 0.57
Cd9P40240 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd9P40240 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd9P40240 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cd9P40240 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd9P40240 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cd9P40240 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd9P40240 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd9P40240 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd9P40240 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.61■□□□□ 0.57
Cd9P40240 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd9P40240 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd9P40240 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd9P40240 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd9P40240 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd9P40240 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.61■□□□□ 0.57
Cd9P40240 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd9P40240 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd9P40240 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd9P40240 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd9P40240 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.6■□□□□ 0.57
Cd9P40240 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cd9P40240 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd9P40240 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cd9P40240 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.6■□□□□ 0.57
Cd9P40240 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.6■□□□□ 0.57
Cd9P40240 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cd9P40240 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cd9P40240 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cd9P40240 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd9P40240 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.59■□□□□ 0.57
Cd9P40240 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.59■□□□□ 0.57
Cd9P40240 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd9P40240 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd9P40240 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd9P40240 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cd9P40240 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Cd9P40240 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cd9P40240 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Cd9P40240 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cd9P40240 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd9P40240 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.59■□□□□ 0.57
Cd9P40240 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Cd9P40240 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cd9P40240 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cd9P40240 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.59■□□□□ 0.57
Cd9P40240 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cd9P40240 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Cd9P40240 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cd9P40240 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cd9P40240 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.58■□□□□ 0.57
Cd9P40240 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cd9P40240 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.58■□□□□ 0.56
Cd9P40240 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd9P40240 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cd9P40240 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cd9P40240 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd9P40240 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd9P40240 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.57■□□□□ 0.56
Cd9P40240 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cd9P40240 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Cd9P40240 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd9P40240 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd9P40240 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms