Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.58■□□□□ 0.56
HmgclP38060 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HmgclP38060 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HmgclP38060 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.58■□□□□ 0.56
HmgclP38060 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HmgclP38060 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HmgclP38060 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HmgclP38060 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HmgclP38060 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HmgclP38060 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HmgclP38060 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HmgclP38060 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HmgclP38060 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HmgclP38060 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.57■□□□□ 0.56
HmgclP38060 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HmgclP38060 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.57■□□□□ 0.56
HmgclP38060 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
HmgclP38060 Gm18284-201ENSMUST00000172604 624 ntBASIC18.57■□□□□ 0.56
HmgclP38060 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HmgclP38060 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HmgclP38060 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HmgclP38060 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HmgclP38060 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HmgclP38060 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HmgclP38060 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HmgclP38060 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HmgclP38060 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HmgclP38060 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HmgclP38060 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HmgclP38060 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HmgclP38060 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HmgclP38060 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HmgclP38060 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HmgclP38060 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HmgclP38060 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.56■□□□□ 0.56
HmgclP38060 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HmgclP38060 Gm10033-202ENSMUST00000211874 928 ntBASIC18.56■□□□□ 0.56
HmgclP38060 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.56■□□□□ 0.56
HmgclP38060 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HmgclP38060 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HmgclP38060 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HmgclP38060 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.56■□□□□ 0.56
HmgclP38060 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
HmgclP38060 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HmgclP38060 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HmgclP38060 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
HmgclP38060 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HmgclP38060 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HmgclP38060 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HmgclP38060 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HmgclP38060 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.55■□□□□ 0.56
HmgclP38060 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HmgclP38060 Gm42642-201ENSMUST00000200683 355 ntBASIC18.55■□□□□ 0.56
HmgclP38060 Golph3-205ENSMUST00000228671 2842 ntBASIC18.55■□□□□ 0.56
HmgclP38060 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HmgclP38060 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HmgclP38060 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.55■□□□□ 0.56
HmgclP38060 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HmgclP38060 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HmgclP38060 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HmgclP38060 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HmgclP38060 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HmgclP38060 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HmgclP38060 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HmgclP38060 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HmgclP38060 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.54■□□□□ 0.56
HmgclP38060 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HmgclP38060 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HmgclP38060 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
HmgclP38060 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HmgclP38060 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HmgclP38060 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.53■□□□□ 0.56
HmgclP38060 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HmgclP38060 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.53■□□□□ 0.56
HmgclP38060 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HmgclP38060 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.53■□□□□ 0.56
HmgclP38060 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.53■□□□□ 0.56
HmgclP38060 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HmgclP38060 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HmgclP38060 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HmgclP38060 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.52■□□□□ 0.56
HmgclP38060 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HmgclP38060 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HmgclP38060 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HmgclP38060 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
HmgclP38060 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.52■□□□□ 0.56
HmgclP38060 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.52■□□□□ 0.56
HmgclP38060 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms