Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Vcam1P29533 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Vcam1P29533 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Vcam1P29533 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Vcam1P29533 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Vcam1P29533 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Vcam1P29533 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.81■■□□□ 1.08
Vcam1P29533 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcam1P29533 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcam1P29533 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Vcam1P29533 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcam1P29533 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Vcam1P29533 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcam1P29533 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Vcam1P29533 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vcam1P29533 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vcam1P29533 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.8■■□□□ 1.08
Vcam1P29533 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Vcam1P29533 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Vcam1P29533 Gm10812-201ENSMUST00000099864 546 ntBASIC21.8■■□□□ 1.08
Vcam1P29533 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Vcam1P29533 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vcam1P29533 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Vcam1P29533 Gm5643-201ENSMUST00000117081 966 ntBASIC21.79■■□□□ 1.08
Vcam1P29533 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.79■■□□□ 1.08
Vcam1P29533 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vcam1P29533 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Vcam1P29533 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vcam1P29533 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcam1P29533 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vcam1P29533 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.78■■□□□ 1.08
Vcam1P29533 Gm11249-201ENSMUST00000117071 859 ntBASIC21.78■■□□□ 1.08
Vcam1P29533 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vcam1P29533 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcam1P29533 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcam1P29533 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcam1P29533 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.78■■□□□ 1.08
Vcam1P29533 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcam1P29533 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Vcam1P29533 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcam1P29533 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vcam1P29533 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcam1P29533 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.77■■□□□ 1.08
Vcam1P29533 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.77■■□□□ 1.08
Vcam1P29533 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcam1P29533 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcam1P29533 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcam1P29533 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcam1P29533 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcam1P29533 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcam1P29533 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcam1P29533 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcam1P29533 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.76■■□□□ 1.07
Vcam1P29533 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcam1P29533 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcam1P29533 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Vcam1P29533 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Golph3-202ENSMUST00000226517 2359 ntBASIC21.75■■□□□ 1.07
Vcam1P29533 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.75■■□□□ 1.07
Vcam1P29533 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.75■■□□□ 1.07
Vcam1P29533 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.75■■□□□ 1.07
Vcam1P29533 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vcam1P29533 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcam1P29533 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcam1P29533 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcam1P29533 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcam1P29533 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.74■■□□□ 1.07
Vcam1P29533 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.74■■□□□ 1.07
Vcam1P29533 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.74■■□□□ 1.07
Vcam1P29533 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcam1P29533 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcam1P29533 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcam1P29533 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcam1P29533 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.73■■□□□ 1.07
Vcam1P29533 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Vcam1P29533 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.73■■□□□ 1.07
Vcam1P29533 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.73■■□□□ 1.07
Vcam1P29533 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.73■■□□□ 1.07
Vcam1P29533 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Vcam1P29533 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vcam1P29533 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms