Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Irf8P23611 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.36■□□□□ 0.85
Irf8P23611 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf8P23611 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf8P23611 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf8P23611 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Irf8P23611 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Irf8P23611 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf8P23611 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.35■□□□□ 0.85
Irf8P23611 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf8P23611 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf8P23611 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf8P23611 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Irf8P23611 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.35■□□□□ 0.85
Irf8P23611 Gm42569-201ENSMUST00000200539 472 ntBASIC20.35■□□□□ 0.85
Irf8P23611 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf8P23611 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf8P23611 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf8P23611 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Irf8P23611 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Irf8P23611 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Irf8P23611 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf8P23611 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Irf8P23611 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf8P23611 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Irf8P23611 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf8P23611 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf8P23611 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Irf8P23611 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf8P23611 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf8P23611 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.34■□□□□ 0.85
Irf8P23611 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Irf8P23611 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Irf8P23611 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf8P23611 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf8P23611 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Irf8P23611 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Irf8P23611 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf8P23611 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.33■□□□□ 0.85
Irf8P23611 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf8P23611 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.33■□□□□ 0.85
Irf8P23611 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.33■□□□□ 0.85
Irf8P23611 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf8P23611 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Irf8P23611 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf8P23611 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.33■□□□□ 0.84
Irf8P23611 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf8P23611 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf8P23611 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf8P23611 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Irf8P23611 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf8P23611 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf8P23611 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf8P23611 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Irf8P23611 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Irf8P23611 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf8P23611 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.32■□□□□ 0.84
Irf8P23611 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf8P23611 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Irf8P23611 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf8P23611 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf8P23611 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.31■□□□□ 0.84
Irf8P23611 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf8P23611 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf8P23611 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf8P23611 Gm6420-201ENSMUST00000193885 723 ntBASIC20.31■□□□□ 0.84
Irf8P23611 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf8P23611 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf8P23611 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf8P23611 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf8P23611 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Irf8P23611 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf8P23611 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf8P23611 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf8P23611 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.3■□□□□ 0.84
Irf8P23611 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.3■□□□□ 0.84
Irf8P23611 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf8P23611 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf8P23611 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Irf8P23611 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.3■□□□□ 0.84
Irf8P23611 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf8P23611 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Irf8P23611 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf8P23611 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf8P23611 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf8P23611 Gm27405-201ENSMUST00000184201 112 ntBASIC20.29■□□□□ 0.84
Irf8P23611 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf8P23611 Iqck-206ENSMUST00000208658 2891 ntBASIC20.29■□□□□ 0.84
Irf8P23611 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf8P23611 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Irf8P23611 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf8P23611 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Irf8P23611 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Irf8P23611 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Irf8P23611 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf8P23611 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Irf8P23611 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf8P23611 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf8P23611 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf8P23611 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms