Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6bP23440 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pde6bP23440 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6bP23440 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.44■□□□□ 0.86
Pde6bP23440 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.44■□□□□ 0.86
Pde6bP23440 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6bP23440 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.44■□□□□ 0.86
Pde6bP23440 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Pde6bP23440 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Pde6bP23440 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.44■□□□□ 0.86
Pde6bP23440 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6bP23440 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Pde6bP23440 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6bP23440 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pde6bP23440 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6bP23440 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6bP23440 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pde6bP23440 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pde6bP23440 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6bP23440 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6bP23440 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.43■□□□□ 0.86
Pde6bP23440 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6bP23440 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.43■□□□□ 0.86
Pde6bP23440 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6bP23440 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6bP23440 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pde6bP23440 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6bP23440 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6bP23440 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.43■□□□□ 0.86
Pde6bP23440 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6bP23440 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6bP23440 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pde6bP23440 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pde6bP23440 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.42■□□□□ 0.86
Pde6bP23440 Gm37856-201ENSMUST00000191634 999 ntBASIC20.42■□□□□ 0.86
Pde6bP23440 Gm26524-201ENSMUST00000192339 390 ntBASIC20.42■□□□□ 0.86
Pde6bP23440 Rab3c-203ENSMUST00000224180 967 ntBASIC20.42■□□□□ 0.86
Pde6bP23440 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pde6bP23440 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pde6bP23440 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Pde6bP23440 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.41■□□□□ 0.86
Pde6bP23440 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pde6bP23440 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6bP23440 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pde6bP23440 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pde6bP23440 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Pde6bP23440 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pde6bP23440 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6bP23440 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6bP23440 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.4■□□□□ 0.86
Pde6bP23440 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6bP23440 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
Pde6bP23440 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6bP23440 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6bP23440 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6bP23440 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6bP23440 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6bP23440 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pde6bP23440 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pde6bP23440 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pde6bP23440 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.39■□□□□ 0.85
Pde6bP23440 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pde6bP23440 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pde6bP23440 Trmt13-210ENSMUST00000198454 880 ntBASIC20.39■□□□□ 0.85
Pde6bP23440 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pde6bP23440 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.39■□□□□ 0.85
Pde6bP23440 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pde6bP23440 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pde6bP23440 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pde6bP23440 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pde6bP23440 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Pde6bP23440 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pde6bP23440 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.38■□□□□ 0.85
Pde6bP23440 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6bP23440 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6bP23440 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6bP23440 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6bP23440 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6bP23440 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6bP23440 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pde6bP23440 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6bP23440 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6bP23440 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.37■□□□□ 0.85
Pde6bP23440 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Pde6bP23440 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pde6bP23440 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6bP23440 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6bP23440 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms