Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.97■□□□□ 0.47
BdnfP21237 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
BdnfP21237 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 Spcs1-204ENSMUST00000226782 949 ntBASIC17.97■□□□□ 0.47
BdnfP21237 Gm13241-201ENSMUST00000094493 780 ntBASIC17.97■□□□□ 0.47
BdnfP21237 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
BdnfP21237 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
BdnfP21237 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.97■□□□□ 0.47
BdnfP21237 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BdnfP21237 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
BdnfP21237 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BdnfP21237 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.96■□□□□ 0.47
BdnfP21237 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BdnfP21237 Gm12251-201ENSMUST00000117893 792 ntBASIC17.96■□□□□ 0.47
BdnfP21237 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.96■□□□□ 0.47
BdnfP21237 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.96■□□□□ 0.47
BdnfP21237 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.96■□□□□ 0.47
BdnfP21237 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BdnfP21237 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.96■□□□□ 0.47
BdnfP21237 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.96■□□□□ 0.47
BdnfP21237 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BdnfP21237 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BdnfP21237 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
BdnfP21237 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BdnfP21237 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.95■□□□□ 0.46
BdnfP21237 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BdnfP21237 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.95■□□□□ 0.46
BdnfP21237 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.95■□□□□ 0.46
BdnfP21237 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.95■□□□□ 0.46
BdnfP21237 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
BdnfP21237 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
BdnfP21237 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BdnfP21237 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BdnfP21237 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BdnfP21237 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BdnfP21237 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BdnfP21237 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.95■□□□□ 0.46
BdnfP21237 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BdnfP21237 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
BdnfP21237 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BdnfP21237 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BdnfP21237 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.94■□□□□ 0.46
BdnfP21237 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BdnfP21237 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
BdnfP21237 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BdnfP21237 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BdnfP21237 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BdnfP21237 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BdnfP21237 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BdnfP21237 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BdnfP21237 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BdnfP21237 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BdnfP21237 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BdnfP21237 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BdnfP21237 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.93■□□□□ 0.46
BdnfP21237 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BdnfP21237 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BdnfP21237 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BdnfP21237 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BdnfP21237 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BdnfP21237 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.93■□□□□ 0.46
BdnfP21237 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.93■□□□□ 0.46
BdnfP21237 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
BdnfP21237 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BdnfP21237 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
BdnfP21237 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BdnfP21237 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BdnfP21237 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
BdnfP21237 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BdnfP21237 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
BdnfP21237 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
BdnfP21237 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BdnfP21237 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BdnfP21237 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
BdnfP21237 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
BdnfP21237 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.91■□□□□ 0.46
BdnfP21237 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BdnfP21237 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BdnfP21237 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BdnfP21237 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BdnfP21237 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms