Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.73■□□□□ 0.43
ChrneP20782 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ChrneP20782 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.73■□□□□ 0.43
ChrneP20782 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.73■□□□□ 0.43
ChrneP20782 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ChrneP20782 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ChrneP20782 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ChrneP20782 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
ChrneP20782 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.72■□□□□ 0.43
ChrneP20782 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ChrneP20782 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.72■□□□□ 0.43
ChrneP20782 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ChrneP20782 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChrneP20782 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ChrneP20782 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChrneP20782 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChrneP20782 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ChrneP20782 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ChrneP20782 Golph3-205ENSMUST00000228671 2842 ntBASIC17.71■□□□□ 0.43
ChrneP20782 Gm13146-201ENSMUST00000118508 780 ntBASIC17.71■□□□□ 0.43
ChrneP20782 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ChrneP20782 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.71■□□□□ 0.43
ChrneP20782 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.71■□□□□ 0.43
ChrneP20782 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.71■□□□□ 0.43
ChrneP20782 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChrneP20782 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChrneP20782 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ChrneP20782 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
ChrneP20782 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ChrneP20782 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.7■□□□□ 0.42
ChrneP20782 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
ChrneP20782 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
ChrneP20782 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChrneP20782 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ChrneP20782 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.69■□□□□ 0.42
ChrneP20782 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ChrneP20782 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.69■□□□□ 0.42
ChrneP20782 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ChrneP20782 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChrneP20782 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChrneP20782 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ChrneP20782 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.68■□□□□ 0.42
ChrneP20782 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ChrneP20782 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChrneP20782 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.68■□□□□ 0.42
ChrneP20782 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ChrneP20782 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChrneP20782 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ChrneP20782 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChrneP20782 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChrneP20782 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ChrneP20782 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChrneP20782 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.67■□□□□ 0.42
ChrneP20782 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.67■□□□□ 0.42
ChrneP20782 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChrneP20782 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChrneP20782 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.67■□□□□ 0.42
ChrneP20782 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChrneP20782 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.67■□□□□ 0.42
ChrneP20782 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChrneP20782 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms