Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TP20293 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TP20293 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.62■□□□□ 0.41
TP20293 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.62■□□□□ 0.41
TP20293 Gm10493-201ENSMUST00000097270 612 ntBASIC17.62■□□□□ 0.41
TP20293 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TP20293 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TP20293 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TP20293 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TP20293 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TP20293 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TP20293 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TP20293 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
TP20293 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.61■□□□□ 0.41
TP20293 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TP20293 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TP20293 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.6■□□□□ 0.41
TP20293 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TP20293 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TP20293 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TP20293 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TP20293 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TP20293 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.6■□□□□ 0.41
TP20293 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.6■□□□□ 0.41
TP20293 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.6■□□□□ 0.41
TP20293 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TP20293 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.6■□□□□ 0.41
TP20293 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TP20293 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.6■□□□□ 0.41
TP20293 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TP20293 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TP20293 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TP20293 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.59■□□□□ 0.41
TP20293 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.59■□□□□ 0.41
TP20293 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TP20293 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TP20293 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.58■□□□□ 0.41
TP20293 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TP20293 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TP20293 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TP20293 Gm18284-201ENSMUST00000172604 624 ntBASIC17.58■□□□□ 0.4
TP20293 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.58■□□□□ 0.4
TP20293 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.58■□□□□ 0.4
TP20293 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TP20293 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.58■□□□□ 0.4
TP20293 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TP20293 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TP20293 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TP20293 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
TP20293 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TP20293 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TP20293 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TP20293 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TP20293 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TP20293 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TP20293 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.57■□□□□ 0.4
TP20293 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TP20293 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TP20293 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.57■□□□□ 0.4
TP20293 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TP20293 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TP20293 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TP20293 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.56■□□□□ 0.4
TP20293 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TP20293 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TP20293 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TP20293 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.56■□□□□ 0.4
TP20293 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TP20293 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TP20293 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms