Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn1P18608 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn1P18608 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn1P18608 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn1P18608 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hmgn1P18608 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hmgn1P18608 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn1P18608 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn1P18608 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.21■□□□□ 0.35
Hmgn1P18608 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.21■□□□□ 0.35
Hmgn1P18608 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hmgn1P18608 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Hmgn1P18608 Gm9959-201ENSMUST00000068277 390 ntBASIC17.21■□□□□ 0.35
Hmgn1P18608 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn1P18608 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn1P18608 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn1P18608 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hmgn1P18608 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgn1P18608 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hmgn1P18608 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgn1P18608 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn1P18608 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgn1P18608 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.2■□□□□ 0.34
Hmgn1P18608 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn1P18608 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn1P18608 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn1P18608 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn1P18608 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn1P18608 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn1P18608 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgn1P18608 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn1P18608 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn1P18608 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgn1P18608 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.19■□□□□ 0.34
Hmgn1P18608 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.19■□□□□ 0.34
Hmgn1P18608 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hmgn1P18608 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.19■□□□□ 0.34
Hmgn1P18608 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Hmgn1P18608 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgn1P18608 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn1P18608 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn1P18608 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn1P18608 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmgn1P18608 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn1P18608 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hmgn1P18608 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hmgn1P18608 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn1P18608 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn1P18608 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn1P18608 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn1P18608 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmgn1P18608 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgn1P18608 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn1P18608 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn1P18608 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hmgn1P18608 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmgn1P18608 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn1P18608 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn1P18608 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.17■□□□□ 0.34
Hmgn1P18608 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn1P18608 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hmgn1P18608 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn1P18608 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hmgn1P18608 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn1P18608 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn1P18608 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgn1P18608 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Hmgn1P18608 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn1P18608 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn1P18608 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn1P18608 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn1P18608 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.16■□□□□ 0.34
Hmgn1P18608 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn1P18608 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn1P18608 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn1P18608 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgn1P18608 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hmgn1P18608 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn1P18608 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hmgn1P18608 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn1P18608 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn1P18608 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.15■□□□□ 0.34
Hmgn1P18608 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn1P18608 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn1P18608 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn1P18608 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn1P18608 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hmgn1P18608 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn1P18608 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgn1P18608 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms