Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Gm10033-202ENSMUST00000211874 928 ntBASIC16.34■□□□□ 0.21
PtcraP0C6B2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PtcraP0C6B2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PtcraP0C6B2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PtcraP0C6B2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PtcraP0C6B2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.33■□□□□ 0.2
PtcraP0C6B2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PtcraP0C6B2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PtcraP0C6B2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PtcraP0C6B2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PtcraP0C6B2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PtcraP0C6B2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PtcraP0C6B2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PtcraP0C6B2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.31■□□□□ 0.2
PtcraP0C6B2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Gm18671-201ENSMUST00000214826 683 ntBASIC16.31■□□□□ 0.2
PtcraP0C6B2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PtcraP0C6B2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PtcraP0C6B2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.3■□□□□ 0.2
PtcraP0C6B2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PtcraP0C6B2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Gm8495-201ENSMUST00000188740 694 ntBASIC16.3■□□□□ 0.2
PtcraP0C6B2 Gm42642-201ENSMUST00000200683 355 ntBASIC16.3■□□□□ 0.2
PtcraP0C6B2 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.3■□□□□ 0.2
PtcraP0C6B2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PtcraP0C6B2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PtcraP0C6B2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PtcraP0C6B2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PtcraP0C6B2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PtcraP0C6B2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PtcraP0C6B2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PtcraP0C6B2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
PtcraP0C6B2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PtcraP0C6B2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PtcraP0C6B2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PtcraP0C6B2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PtcraP0C6B2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PtcraP0C6B2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.28■□□□□ 0.2
PtcraP0C6B2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PtcraP0C6B2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms