Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rc3h2P0C090 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rc3h2P0C090 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.17■□□□□ 0.66
Rc3h2P0C090 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Rc3h2P0C090 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rc3h2P0C090 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rc3h2P0C090 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rc3h2P0C090 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rc3h2P0C090 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rc3h2P0C090 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rc3h2P0C090 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rc3h2P0C090 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rc3h2P0C090 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rc3h2P0C090 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rc3h2P0C090 Gm22240-201ENSMUST00000175225 82 ntBASIC19.15■□□□□ 0.66
Rc3h2P0C090 Gm8520-201ENSMUST00000186517 868 ntBASIC19.15■□□□□ 0.66
Rc3h2P0C090 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rc3h2P0C090 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rc3h2P0C090 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rc3h2P0C090 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rc3h2P0C090 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rc3h2P0C090 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Rc3h2P0C090 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rc3h2P0C090 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rc3h2P0C090 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rc3h2P0C090 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rc3h2P0C090 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rc3h2P0C090 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rc3h2P0C090 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.13■□□□□ 0.65
Rc3h2P0C090 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.13■□□□□ 0.65
Rc3h2P0C090 Gm37856-201ENSMUST00000191634 999 ntBASIC19.13■□□□□ 0.65
Rc3h2P0C090 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.13■□□□□ 0.65
Rc3h2P0C090 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h2P0C090 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h2P0C090 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h2P0C090 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rc3h2P0C090 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h2P0C090 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h2P0C090 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h2P0C090 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h2P0C090 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h2P0C090 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rc3h2P0C090 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h2P0C090 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h2P0C090 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h2P0C090 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h2P0C090 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h2P0C090 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h2P0C090 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
Rc3h2P0C090 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h2P0C090 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h2P0C090 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h2P0C090 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h2P0C090 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h2P0C090 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h2P0C090 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h2P0C090 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h2P0C090 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.09■□□□□ 0.65
Rc3h2P0C090 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h2P0C090 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h2P0C090 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rc3h2P0C090 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.09■□□□□ 0.65
Rc3h2P0C090 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms