Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PdgfrbP05622 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19■□□□□ 0.63
PdgfrbP05622 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PdgfrbP05622 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PdgfrbP05622 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PdgfrbP05622 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19■□□□□ 0.63
PdgfrbP05622 CT010467.1-202ENSMUST00000205406 714 ntBASIC19■□□□□ 0.63
PdgfrbP05622 Gm10493-201ENSMUST00000097270 612 ntBASIC19■□□□□ 0.63
PdgfrbP05622 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19■□□□□ 0.63
PdgfrbP05622 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PdgfrbP05622 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PdgfrbP05622 BC021767-201ENSMUST00000126387 1716 ntBASIC19■□□□□ 0.63
PdgfrbP05622 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PdgfrbP05622 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PdgfrbP05622 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.99■□□□□ 0.63
PdgfrbP05622 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.99■□□□□ 0.63
PdgfrbP05622 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.99■□□□□ 0.63
PdgfrbP05622 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PdgfrbP05622 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PdgfrbP05622 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.98■□□□□ 0.63
PdgfrbP05622 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.98■□□□□ 0.63
PdgfrbP05622 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PdgfrbP05622 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.98■□□□□ 0.63
PdgfrbP05622 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.98■□□□□ 0.63
PdgfrbP05622 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.98■□□□□ 0.63
PdgfrbP05622 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.98■□□□□ 0.63
PdgfrbP05622 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.98■□□□□ 0.63
PdgfrbP05622 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PdgfrbP05622 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.98■□□□□ 0.63
PdgfrbP05622 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
PdgfrbP05622 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PdgfrbP05622 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PdgfrbP05622 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PdgfrbP05622 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.97■□□□□ 0.63
PdgfrbP05622 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
PdgfrbP05622 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.97■□□□□ 0.63
PdgfrbP05622 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PdgfrbP05622 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PdgfrbP05622 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PdgfrbP05622 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PdgfrbP05622 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PdgfrbP05622 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.97■□□□□ 0.63
PdgfrbP05622 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PdgfrbP05622 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PdgfrbP05622 Gm13234-201ENSMUST00000120010 747 ntBASIC18.96■□□□□ 0.63
PdgfrbP05622 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PdgfrbP05622 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PdgfrbP05622 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PdgfrbP05622 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PdgfrbP05622 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.96■□□□□ 0.63
PdgfrbP05622 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PdgfrbP05622 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PdgfrbP05622 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.95■□□□□ 0.62
PdgfrbP05622 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PdgfrbP05622 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.95■□□□□ 0.62
PdgfrbP05622 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.95■□□□□ 0.62
PdgfrbP05622 Gm42778-201ENSMUST00000199644 553 ntBASIC18.95■□□□□ 0.62
PdgfrbP05622 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PdgfrbP05622 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PdgfrbP05622 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PdgfrbP05622 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PdgfrbP05622 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PdgfrbP05622 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.94■□□□□ 0.62
PdgfrbP05622 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.94■□□□□ 0.62
PdgfrbP05622 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms