Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Gm45417-201ENSMUST00000209533 758 ntBASIC17.68■□□□□ 0.42
IghmP01872 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IghmP01872 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IghmP01872 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
IghmP01872 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IghmP01872 Gm26833-201ENSMUST00000180899 440 ntBASIC17.67■□□□□ 0.42
IghmP01872 Gm40848-201ENSMUST00000221998 324 ntBASIC17.67■□□□□ 0.42
IghmP01872 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IghmP01872 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IghmP01872 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IghmP01872 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IghmP01872 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IghmP01872 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IghmP01872 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IghmP01872 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IghmP01872 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IghmP01872 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
IghmP01872 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
IghmP01872 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
IghmP01872 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.66■□□□□ 0.42
IghmP01872 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IghmP01872 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
IghmP01872 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
IghmP01872 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IghmP01872 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.65■□□□□ 0.42
IghmP01872 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IghmP01872 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.65■□□□□ 0.42
IghmP01872 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.65■□□□□ 0.42
IghmP01872 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IghmP01872 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IghmP01872 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IghmP01872 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IghmP01872 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IghmP01872 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.65■□□□□ 0.42
IghmP01872 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.65■□□□□ 0.42
IghmP01872 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IghmP01872 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IghmP01872 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IghmP01872 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
IghmP01872 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IghmP01872 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IghmP01872 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.64■□□□□ 0.41
IghmP01872 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.64■□□□□ 0.41
IghmP01872 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.63■□□□□ 0.41
IghmP01872 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IghmP01872 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IghmP01872 Gm43017-201ENSMUST00000198296 752 ntBASIC17.63■□□□□ 0.41
IghmP01872 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IghmP01872 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IghmP01872 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IghmP01872 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.63■□□□□ 0.41
IghmP01872 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.63■□□□□ 0.41
IghmP01872 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IghmP01872 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.62■□□□□ 0.41
IghmP01872 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
IghmP01872 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.62■□□□□ 0.41
IghmP01872 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IghmP01872 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.62■□□□□ 0.41
IghmP01872 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IghmP01872 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
IghmP01872 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.61■□□□□ 0.41
IghmP01872 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.61■□□□□ 0.41
IghmP01872 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.61■□□□□ 0.41
IghmP01872 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IghmP01872 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.61■□□□□ 0.41
IghmP01872 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms