Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Gm10399-202ENSMUST00000202768 748 ntBASIC13.74□□□□□ -0.21
TcraP01849 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.74□□□□□ -0.21
TcraP01849 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.74□□□□□ -0.21
TcraP01849 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
TcraP01849 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.73□□□□□ -0.21
TcraP01849 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TcraP01849 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TcraP01849 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.73□□□□□ -0.21
TcraP01849 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.73□□□□□ -0.21
TcraP01849 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TcraP01849 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TcraP01849 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.73□□□□□ -0.21
TcraP01849 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TcraP01849 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TcraP01849 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.72□□□□□ -0.21
TcraP01849 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
TcraP01849 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.72□□□□□ -0.21
TcraP01849 Gm13238-201ENSMUST00000117655 780 ntBASIC13.72□□□□□ -0.21
TcraP01849 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TcraP01849 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.72□□□□□ -0.21
TcraP01849 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.71□□□□□ -0.21
TcraP01849 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.71□□□□□ -0.21
TcraP01849 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TcraP01849 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TcraP01849 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TcraP01849 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
TcraP01849 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TcraP01849 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TcraP01849 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TcraP01849 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TcraP01849 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TcraP01849 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TcraP01849 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TcraP01849 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TcraP01849 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TcraP01849 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
TcraP01849 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TcraP01849 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.7□□□□□ -0.22
TcraP01849 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TcraP01849 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.7□□□□□ -0.22
TcraP01849 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms