Protein–RNA interactions for Protein: P01735

T-cell receptor beta chain V region 86T1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01735 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.29■□□□□ 0.36
P01735 Gm38205-201ENSMUST00000192243 258 ntBASIC17.29■□□□□ 0.36
P01735 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01735 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01735 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01735 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01735 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01735 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.28■□□□□ 0.36
P01735 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01735 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
P01735 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01735 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.28■□□□□ 0.36
P01735 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01735 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01735 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01735 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01735 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
P01735 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01735 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P01735 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
P01735 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P01735 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01735 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
P01735 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.27■□□□□ 0.36
P01735 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.27■□□□□ 0.36
P01735 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01735 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01735 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
P01735 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01735 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01735 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01735 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
P01735 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01735 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01735 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P01735 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01735 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01735 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.26■□□□□ 0.35
P01735 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.26■□□□□ 0.35
P01735 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.26■□□□□ 0.35
P01735 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.26■□□□□ 0.35
P01735 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01735 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.26■□□□□ 0.35
P01735 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01735 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01735 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01735 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01735 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.25■□□□□ 0.35
P01735 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
P01735 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
P01735 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
P01735 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01735 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01735 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01735 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
P01735 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
P01735 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.24■□□□□ 0.35
P01735 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.24■□□□□ 0.35
P01735 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01735 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01735 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01735 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.24■□□□□ 0.35
P01735 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
P01735 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01735 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01735 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01735 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01735 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01735 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01735 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
P01735 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms