Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Vti1aO89116 Gm22240-201ENSMUST00000175225 82 ntBASIC20.27■□□□□ 0.84
Vti1aO89116 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.27■□□□□ 0.84
Vti1aO89116 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vti1aO89116 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vti1aO89116 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vti1aO89116 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.27■□□□□ 0.83
Vti1aO89116 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Vti1aO89116 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1aO89116 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1aO89116 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1aO89116 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Vti1aO89116 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1aO89116 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1aO89116 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1aO89116 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vti1aO89116 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Vti1aO89116 Gm13148-201ENSMUST00000118892 745 ntBASIC20.26■□□□□ 0.83
Vti1aO89116 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vti1aO89116 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1aO89116 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.26■□□□□ 0.83
Vti1aO89116 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vti1aO89116 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vti1aO89116 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Vti1aO89116 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vti1aO89116 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vti1aO89116 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vti1aO89116 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vti1aO89116 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Vti1aO89116 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.24■□□□□ 0.83
Vti1aO89116 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Vti1aO89116 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1aO89116 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1aO89116 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vti1aO89116 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1aO89116 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1aO89116 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1aO89116 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vti1aO89116 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.24■□□□□ 0.83
Vti1aO89116 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1aO89116 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1aO89116 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1aO89116 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.24■□□□□ 0.83
Vti1aO89116 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1aO89116 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.23■□□□□ 0.83
Vti1aO89116 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vti1aO89116 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vti1aO89116 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vti1aO89116 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Vti1aO89116 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1aO89116 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.22■□□□□ 0.83
Vti1aO89116 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1aO89116 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
Vti1aO89116 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.22■□□□□ 0.83
Vti1aO89116 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1aO89116 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1aO89116 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1aO89116 Gm13534-201ENSMUST00000121169 513 ntBASIC20.22■□□□□ 0.83
Vti1aO89116 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Vti1aO89116 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1aO89116 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Vti1aO89116 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1aO89116 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Vti1aO89116 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1aO89116 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1aO89116 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1aO89116 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1aO89116 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1aO89116 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1aO89116 Gm8520-201ENSMUST00000186517 868 ntBASIC20.21■□□□□ 0.83
Vti1aO89116 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Vti1aO89116 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1aO89116 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1aO89116 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1aO89116 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1aO89116 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1aO89116 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1aO89116 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1aO89116 Gm12527-201ENSMUST00000117967 564 ntBASIC20.2■□□□□ 0.82
Vti1aO89116 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Vti1aO89116 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1aO89116 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.2■□□□□ 0.82
Vti1aO89116 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1aO89116 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1aO89116 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1aO89116 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1aO89116 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Vti1aO89116 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1aO89116 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1aO89116 Gm6211-202ENSMUST00000167849 925 ntBASIC20.19■□□□□ 0.82
Vti1aO89116 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1aO89116 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Vti1aO89116 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1aO89116 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1aO89116 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1aO89116 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1aO89116 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1aO89116 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vti1aO89116 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vti1aO89116 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms