Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.44■□□□□ 0.7
Syn1O88935 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.44■□□□□ 0.7
Syn1O88935 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Syn1O88935 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Syn1O88935 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.44■□□□□ 0.7
Syn1O88935 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syn1O88935 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syn1O88935 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syn1O88935 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syn1O88935 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syn1O88935 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syn1O88935 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.44■□□□□ 0.7
Syn1O88935 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.43■□□□□ 0.7
Syn1O88935 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syn1O88935 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syn1O88935 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Syn1O88935 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Syn1O88935 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Syn1O88935 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.43■□□□□ 0.7
Syn1O88935 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syn1O88935 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syn1O88935 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syn1O88935 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syn1O88935 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.42■□□□□ 0.7
Syn1O88935 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syn1O88935 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Syn1O88935 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syn1O88935 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syn1O88935 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syn1O88935 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Syn1O88935 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.42■□□□□ 0.7
Syn1O88935 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syn1O88935 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syn1O88935 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Syn1O88935 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Syn1O88935 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syn1O88935 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syn1O88935 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.41■□□□□ 0.7
Syn1O88935 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.41■□□□□ 0.7
Syn1O88935 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Syn1O88935 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Syn1O88935 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syn1O88935 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Syn1O88935 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syn1O88935 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Syn1O88935 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.41■□□□□ 0.7
Syn1O88935 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syn1O88935 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syn1O88935 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syn1O88935 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syn1O88935 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syn1O88935 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Syn1O88935 Gm10517-202ENSMUST00000192970 758 ntBASIC19.4■□□□□ 0.7
Syn1O88935 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Syn1O88935 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syn1O88935 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
Syn1O88935 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syn1O88935 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Syn1O88935 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Syn1O88935 Gm6659-201ENSMUST00000174752 547 ntBASIC19.39■□□□□ 0.69
Syn1O88935 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.39■□□□□ 0.69
Syn1O88935 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Syn1O88935 AA386476-201ENSMUST00000098781 1665 ntBASIC19.39■□□□□ 0.69
Syn1O88935 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Syn1O88935 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Syn1O88935 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Syn1O88935 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.38■□□□□ 0.69
Syn1O88935 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.38■□□□□ 0.69
Syn1O88935 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.38■□□□□ 0.69
Syn1O88935 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.38■□□□□ 0.69
Syn1O88935 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.38■□□□□ 0.69
Syn1O88935 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.38■□□□□ 0.69
Syn1O88935 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Syn1O88935 Gm18101-201ENSMUST00000215769 548 ntBASIC19.38■□□□□ 0.69
Syn1O88935 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Syn1O88935 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Syn1O88935 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Syn1O88935 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.37■□□□□ 0.69
Syn1O88935 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.37■□□□□ 0.69
Syn1O88935 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Syn1O88935 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Syn1O88935 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syn1O88935 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Syn1O88935 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.37■□□□□ 0.69
Syn1O88935 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.37■□□□□ 0.69
Syn1O88935 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Syn1O88935 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syn1O88935 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms