Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac3O88895 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac3O88895 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.75■□□□□ 0.27
Hdac3O88895 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hdac3O88895 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.75■□□□□ 0.27
Hdac3O88895 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac3O88895 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac3O88895 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hdac3O88895 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.75■□□□□ 0.27
Hdac3O88895 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hdac3O88895 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Hdac3O88895 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac3O88895 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac3O88895 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac3O88895 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.75■□□□□ 0.27
Hdac3O88895 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.75■□□□□ 0.27
Hdac3O88895 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Hdac3O88895 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Hdac3O88895 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Hdac3O88895 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Hdac3O88895 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.74■□□□□ 0.27
Hdac3O88895 Gm11421-201ENSMUST00000122124 294 ntBASIC16.74■□□□□ 0.27
Hdac3O88895 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.74■□□□□ 0.27
Hdac3O88895 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.74■□□□□ 0.27
Hdac3O88895 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.74■□□□□ 0.27
Hdac3O88895 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hdac3O88895 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hdac3O88895 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Hdac3O88895 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Hdac3O88895 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.73■□□□□ 0.27
Hdac3O88895 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Hdac3O88895 BC021767-201ENSMUST00000126387 1716 ntBASIC16.73■□□□□ 0.27
Hdac3O88895 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hdac3O88895 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac3O88895 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac3O88895 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac3O88895 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hdac3O88895 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac3O88895 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Hdac3O88895 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.72■□□□□ 0.27
Hdac3O88895 Gm26833-201ENSMUST00000180899 440 ntBASIC16.72■□□□□ 0.27
Hdac3O88895 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac3O88895 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Hdac3O88895 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac3O88895 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.72■□□□□ 0.27
Hdac3O88895 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hdac3O88895 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac3O88895 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac3O88895 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Hdac3O88895 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.71■□□□□ 0.27
Hdac3O88895 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Hdac3O88895 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac3O88895 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.71■□□□□ 0.27
Hdac3O88895 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac3O88895 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac3O88895 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac3O88895 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hdac3O88895 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hdac3O88895 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac3O88895 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac3O88895 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac3O88895 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hdac3O88895 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hdac3O88895 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac3O88895 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hdac3O88895 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.7■□□□□ 0.26
Hdac3O88895 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hdac3O88895 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac3O88895 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac3O88895 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Hdac3O88895 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac3O88895 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.69■□□□□ 0.26
Hdac3O88895 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Hdac3O88895 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Hdac3O88895 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac3O88895 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms