Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ShdO88834 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShdO88834 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShdO88834 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShdO88834 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShdO88834 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShdO88834 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.24■□□□□ 0.67
ShdO88834 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.24■□□□□ 0.67
ShdO88834 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShdO88834 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShdO88834 Gm10493-201ENSMUST00000097270 612 ntBASIC19.24■□□□□ 0.67
ShdO88834 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShdO88834 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ShdO88834 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ShdO88834 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShdO88834 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.23■□□□□ 0.67
ShdO88834 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShdO88834 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ShdO88834 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.22■□□□□ 0.67
ShdO88834 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
ShdO88834 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.22■□□□□ 0.67
ShdO88834 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShdO88834 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ShdO88834 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ShdO88834 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShdO88834 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShdO88834 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShdO88834 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShdO88834 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShdO88834 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ShdO88834 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ShdO88834 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.21■□□□□ 0.67
ShdO88834 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShdO88834 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.21■□□□□ 0.67
ShdO88834 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
ShdO88834 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShdO88834 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShdO88834 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ShdO88834 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.21■□□□□ 0.67
ShdO88834 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.21■□□□□ 0.67
ShdO88834 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShdO88834 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShdO88834 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
ShdO88834 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShdO88834 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShdO88834 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShdO88834 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShdO88834 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShdO88834 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShdO88834 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.2■□□□□ 0.66
ShdO88834 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.2■□□□□ 0.66
ShdO88834 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.2■□□□□ 0.66
ShdO88834 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.2■□□□□ 0.66
ShdO88834 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ShdO88834 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.2■□□□□ 0.66
ShdO88834 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.2■□□□□ 0.66
ShdO88834 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShdO88834 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ShdO88834 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ShdO88834 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ShdO88834 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShdO88834 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ShdO88834 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ShdO88834 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ShdO88834 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShdO88834 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShdO88834 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ShdO88834 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShdO88834 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ShdO88834 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ShdO88834 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Gm13146-201ENSMUST00000118508 780 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms