Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hcn1O88704 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn1O88704 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn1O88704 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn1O88704 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.95■□□□□ 0.46
Hcn1O88704 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn1O88704 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcn1O88704 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hcn1O88704 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 Gm8495-201ENSMUST00000188740 694 ntBASIC17.94■□□□□ 0.46
Hcn1O88704 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hcn1O88704 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hcn1O88704 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hcn1O88704 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.93■□□□□ 0.46
Hcn1O88704 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hcn1O88704 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn1O88704 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn1O88704 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.93■□□□□ 0.46
Hcn1O88704 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Hcn1O88704 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.93■□□□□ 0.46
Hcn1O88704 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn1O88704 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.93■□□□□ 0.46
Hcn1O88704 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn1O88704 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn1O88704 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hcn1O88704 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Hcn1O88704 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.92■□□□□ 0.46
Hcn1O88704 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hcn1O88704 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.92■□□□□ 0.46
Hcn1O88704 Gm5874-201ENSMUST00000096101 508 ntBASIC17.92■□□□□ 0.46
Hcn1O88704 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hcn1O88704 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn1O88704 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn1O88704 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn1O88704 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Hcn1O88704 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Hcn1O88704 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.91■□□□□ 0.46
Hcn1O88704 Gm27801-201ENSMUST00000184174 223 ntBASIC17.91■□□□□ 0.46
Hcn1O88704 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.91■□□□□ 0.46
Hcn1O88704 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn1O88704 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn1O88704 Gm10493-201ENSMUST00000097270 612 ntBASIC17.91■□□□□ 0.46
Hcn1O88704 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hcn1O88704 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hcn1O88704 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.9■□□□□ 0.46
Hcn1O88704 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.9■□□□□ 0.46
Hcn1O88704 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.9■□□□□ 0.46
Hcn1O88704 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.9■□□□□ 0.46
Hcn1O88704 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.9■□□□□ 0.46
Hcn1O88704 Grk6-206ENSMUST00000224995 2971 ntBASIC17.9■□□□□ 0.46
Hcn1O88704 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hcn1O88704 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.89■□□□□ 0.45
Hcn1O88704 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.89■□□□□ 0.45
Hcn1O88704 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hcn1O88704 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Hcn1O88704 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hcn1O88704 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hcn1O88704 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hcn1O88704 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.88■□□□□ 0.45
Hcn1O88704 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hcn1O88704 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.88■□□□□ 0.45
Hcn1O88704 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hcn1O88704 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms