Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.8■□□□□ 0.28
Cops3O88543 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cops3O88543 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cops3O88543 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.8■□□□□ 0.28
Cops3O88543 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cops3O88543 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.79■□□□□ 0.28
Cops3O88543 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cops3O88543 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cops3O88543 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cops3O88543 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops3O88543 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops3O88543 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops3O88543 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops3O88543 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Cops3O88543 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cops3O88543 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops3O88543 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.78■□□□□ 0.28
Cops3O88543 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.78■□□□□ 0.28
Cops3O88543 Spcs1-204ENSMUST00000226782 949 ntBASIC16.78■□□□□ 0.28
Cops3O88543 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.78■□□□□ 0.28
Cops3O88543 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops3O88543 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Cops3O88543 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops3O88543 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops3O88543 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cops3O88543 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cops3O88543 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cops3O88543 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cops3O88543 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cops3O88543 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cops3O88543 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cops3O88543 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
Cops3O88543 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cops3O88543 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cops3O88543 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cops3O88543 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.77■□□□□ 0.27
Cops3O88543 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cops3O88543 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Cops3O88543 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.76■□□□□ 0.27
Cops3O88543 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Gm12251-201ENSMUST00000117893 792 ntBASIC16.76■□□□□ 0.27
Cops3O88543 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.76■□□□□ 0.27
Cops3O88543 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cops3O88543 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.76■□□□□ 0.27
Cops3O88543 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cops3O88543 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.76■□□□□ 0.27
Cops3O88543 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cops3O88543 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cops3O88543 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.76■□□□□ 0.27
Cops3O88543 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Cops3O88543 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cops3O88543 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cops3O88543 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cops3O88543 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cops3O88543 Gm43137-201ENSMUST00000198052 594 ntBASIC16.75■□□□□ 0.27
Cops3O88543 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cops3O88543 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cops3O88543 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cops3O88543 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cops3O88543 Grk6-206ENSMUST00000224995 2971 ntBASIC16.74■□□□□ 0.27
Cops3O88543 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cops3O88543 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops3O88543 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Cops3O88543 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cops3O88543 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms