Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh5O55240 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh5O55240 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh5O55240 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rdh5O55240 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh5O55240 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.8■□□□□ 0.44
Rdh5O55240 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rdh5O55240 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rdh5O55240 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh5O55240 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.8■□□□□ 0.44
Rdh5O55240 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh5O55240 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rdh5O55240 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rdh5O55240 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.8■□□□□ 0.44
Rdh5O55240 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh5O55240 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh5O55240 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh5O55240 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh5O55240 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh5O55240 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh5O55240 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh5O55240 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.79■□□□□ 0.44
Rdh5O55240 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh5O55240 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh5O55240 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh5O55240 Gm9988-201ENSMUST00000069786 435 ntBASIC17.79■□□□□ 0.44
Rdh5O55240 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.79■□□□□ 0.44
Rdh5O55240 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh5O55240 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh5O55240 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Rdh5O55240 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.79■□□□□ 0.44
Rdh5O55240 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh5O55240 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh5O55240 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh5O55240 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.79■□□□□ 0.44
Rdh5O55240 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 BC021767-201ENSMUST00000126387 1716 ntBASIC17.78■□□□□ 0.44
Rdh5O55240 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rdh5O55240 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rdh5O55240 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.78■□□□□ 0.44
Rdh5O55240 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Rdh5O55240 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rdh5O55240 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Rdh5O55240 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rdh5O55240 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rdh5O55240 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh5O55240 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.78■□□□□ 0.44
Rdh5O55240 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.77■□□□□ 0.44
Rdh5O55240 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh5O55240 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh5O55240 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh5O55240 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rdh5O55240 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.77■□□□□ 0.44
Rdh5O55240 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh5O55240 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
Rdh5O55240 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh5O55240 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.77■□□□□ 0.44
Rdh5O55240 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rdh5O55240 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Rdh5O55240 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rdh5O55240 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rdh5O55240 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.77■□□□□ 0.43
Rdh5O55240 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh5O55240 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh5O55240 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh5O55240 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.76■□□□□ 0.43
Rdh5O55240 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh5O55240 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Rdh5O55240 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh5O55240 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh5O55240 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh5O55240 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.76■□□□□ 0.43
Rdh5O55240 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.76■□□□□ 0.43
Rdh5O55240 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.76■□□□□ 0.43
Rdh5O55240 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.76■□□□□ 0.43
Rdh5O55240 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.76■□□□□ 0.43
Rdh5O55240 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.76■□□□□ 0.43
Rdh5O55240 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh5O55240 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.76■□□□□ 0.43
Rdh5O55240 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh5O55240 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh5O55240 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rdh5O55240 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh5O55240 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh5O55240 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh5O55240 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh5O55240 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rdh5O55240 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh5O55240 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh5O55240 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.75■□□□□ 0.43
Rdh5O55240 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms