Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.89■□□□□ 0.77
Pja1O55176 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pja1O55176 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pja1O55176 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pja1O55176 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pja1O55176 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pja1O55176 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pja1O55176 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pja1O55176 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pja1O55176 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pja1O55176 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.88■□□□□ 0.77
Pja1O55176 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.88■□□□□ 0.77
Pja1O55176 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pja1O55176 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.87■□□□□ 0.77
Pja1O55176 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pja1O55176 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pja1O55176 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pja1O55176 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.87■□□□□ 0.77
Pja1O55176 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Pja1O55176 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.87■□□□□ 0.77
Pja1O55176 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pja1O55176 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pja1O55176 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pja1O55176 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pja1O55176 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pja1O55176 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pja1O55176 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pja1O55176 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pja1O55176 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pja1O55176 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pja1O55176 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pja1O55176 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pja1O55176 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pja1O55176 Gm7860-201ENSMUST00000121190 879 ntBASIC19.86■□□□□ 0.77
Pja1O55176 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pja1O55176 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.86■□□□□ 0.77
Pja1O55176 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pja1O55176 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pja1O55176 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.85■□□□□ 0.77
Pja1O55176 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pja1O55176 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.85■□□□□ 0.77
Pja1O55176 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pja1O55176 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pja1O55176 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.84■□□□□ 0.77
Pja1O55176 Smad6-203ENSMUST00000179458 273 ntBASIC19.84■□□□□ 0.77
Pja1O55176 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pja1O55176 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.84■□□□□ 0.77
Pja1O55176 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.84■□□□□ 0.77
Pja1O55176 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pja1O55176 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pja1O55176 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pja1O55176 Rarb-207ENSMUST00000225921 2756 ntBASIC19.83■□□□□ 0.77
Pja1O55176 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pja1O55176 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pja1O55176 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pja1O55176 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pja1O55176 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pja1O55176 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pja1O55176 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pja1O55176 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Pja1O55176 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pja1O55176 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pja1O55176 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.82■□□□□ 0.76
Pja1O55176 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pja1O55176 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pja1O55176 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.82■□□□□ 0.76
Pja1O55176 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pja1O55176 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pja1O55176 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pja1O55176 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pja1O55176 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pja1O55176 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pja1O55176 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms