Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.85■□□□□ 0.93
Trdmt1O55055 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.85■□□□□ 0.93
Trdmt1O55055 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Trdmt1O55055 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdmt1O55055 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trdmt1O55055 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trdmt1O55055 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trdmt1O55055 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trdmt1O55055 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Trdmt1O55055 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trdmt1O55055 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trdmt1O55055 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trdmt1O55055 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Trdmt1O55055 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trdmt1O55055 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trdmt1O55055 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trdmt1O55055 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trdmt1O55055 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trdmt1O55055 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.83■□□□□ 0.93
Trdmt1O55055 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Trdmt1O55055 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trdmt1O55055 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trdmt1O55055 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trdmt1O55055 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trdmt1O55055 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trdmt1O55055 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trdmt1O55055 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Trdmt1O55055 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trdmt1O55055 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trdmt1O55055 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trdmt1O55055 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trdmt1O55055 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trdmt1O55055 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trdmt1O55055 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trdmt1O55055 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trdmt1O55055 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trdmt1O55055 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trdmt1O55055 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trdmt1O55055 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Trdmt1O55055 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trdmt1O55055 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Trdmt1O55055 Gm715-201ENSMUST00000117865 831 ntBASIC20.81■□□□□ 0.92
Trdmt1O55055 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trdmt1O55055 Gm22325-201ENSMUST00000158904 308 ntBASIC20.81■□□□□ 0.92
Trdmt1O55055 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.81■□□□□ 0.92
Trdmt1O55055 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.81■□□□□ 0.92
Trdmt1O55055 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.81■□□□□ 0.92
Trdmt1O55055 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trdmt1O55055 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trdmt1O55055 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trdmt1O55055 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trdmt1O55055 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trdmt1O55055 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trdmt1O55055 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trdmt1O55055 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trdmt1O55055 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.8■□□□□ 0.92
Trdmt1O55055 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.8■□□□□ 0.92
Trdmt1O55055 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.8■□□□□ 0.92
Trdmt1O55055 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trdmt1O55055 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdmt1O55055 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trdmt1O55055 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trdmt1O55055 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trdmt1O55055 Gm15378-201ENSMUST00000121894 207 ntBASIC20.79■□□□□ 0.92
Trdmt1O55055 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.79■□□□□ 0.92
Trdmt1O55055 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trdmt1O55055 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trdmt1O55055 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trdmt1O55055 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trdmt1O55055 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Trdmt1O55055 Gm13158-201ENSMUST00000122007 736 ntBASIC20.78■□□□□ 0.92
Trdmt1O55055 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.78■□□□□ 0.92
Trdmt1O55055 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.78■□□□□ 0.92
Trdmt1O55055 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.78■□□□□ 0.92
Trdmt1O55055 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trdmt1O55055 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.78■□□□□ 0.92
Trdmt1O55055 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trdmt1O55055 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.78■□□□□ 0.92
Trdmt1O55055 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trdmt1O55055 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trdmt1O55055 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trdmt1O55055 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trdmt1O55055 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.77■□□□□ 0.92
Trdmt1O55055 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms