Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kcnu1O54982 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Kcnu1O54982 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kcnu1O54982 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Kcnu1O54982 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Kcnu1O54982 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kcnu1O54982 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcnu1O54982 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcnu1O54982 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Kcnu1O54982 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcnu1O54982 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcnu1O54982 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Kcnu1O54982 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcnu1O54982 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Kcnu1O54982 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcnu1O54982 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcnu1O54982 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kcnu1O54982 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kcnu1O54982 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Kcnu1O54982 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.08■□□□□ 0.8
Kcnu1O54982 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kcnu1O54982 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kcnu1O54982 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Kcnu1O54982 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Kcnu1O54982 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.07■□□□□ 0.8
Kcnu1O54982 Gm43060-201ENSMUST00000200621 289 ntBASIC20.07■□□□□ 0.8
Kcnu1O54982 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.07■□□□□ 0.8
Kcnu1O54982 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kcnu1O54982 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kcnu1O54982 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Kcnu1O54982 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kcnu1O54982 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Kcnu1O54982 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.06■□□□□ 0.8
Kcnu1O54982 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcnu1O54982 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Kcnu1O54982 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcnu1O54982 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcnu1O54982 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcnu1O54982 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcnu1O54982 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.05■□□□□ 0.8
Kcnu1O54982 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.05■□□□□ 0.8
Kcnu1O54982 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.05■□□□□ 0.8
Kcnu1O54982 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcnu1O54982 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcnu1O54982 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcnu1O54982 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcnu1O54982 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcnu1O54982 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.04■□□□□ 0.8
Kcnu1O54982 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kcnu1O54982 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcnu1O54982 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Kcnu1O54982 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.03■□□□□ 0.8
Kcnu1O54982 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.03■□□□□ 0.8
Kcnu1O54982 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kcnu1O54982 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.03■□□□□ 0.8
Kcnu1O54982 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Kcnu1O54982 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.03■□□□□ 0.8
Kcnu1O54982 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kcnu1O54982 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kcnu1O54982 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kcnu1O54982 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Kcnu1O54982 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Kcnu1O54982 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.02■□□□□ 0.8
Kcnu1O54982 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Kcnu1O54982 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.02■□□□□ 0.8
Kcnu1O54982 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Kcnu1O54982 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kcnu1O54982 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kcnu1O54982 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kcnu1O54982 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Kcnu1O54982 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Kcnu1O54982 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Kcnu1O54982 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kcnu1O54982 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kcnu1O54982 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.01■□□□□ 0.79
Kcnu1O54982 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Kcnu1O54982 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Kcnu1O54982 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms