Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sptlc1O35704 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sptlc1O35704 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sptlc1O35704 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.62■□□□□ 0.89
Sptlc1O35704 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.62■□□□□ 0.89
Sptlc1O35704 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sptlc1O35704 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sptlc1O35704 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sptlc1O35704 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sptlc1O35704 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Sptlc1O35704 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sptlc1O35704 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sptlc1O35704 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sptlc1O35704 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.61■□□□□ 0.89
Sptlc1O35704 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sptlc1O35704 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sptlc1O35704 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sptlc1O35704 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sptlc1O35704 Notumos-201ENSMUST00000151998 2659 ntBASIC20.6■□□□□ 0.89
Sptlc1O35704 Gm10812-201ENSMUST00000099864 546 ntBASIC20.6■□□□□ 0.89
Sptlc1O35704 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sptlc1O35704 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sptlc1O35704 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sptlc1O35704 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sptlc1O35704 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sptlc1O35704 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sptlc1O35704 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sptlc1O35704 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sptlc1O35704 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.59■□□□□ 0.89
Sptlc1O35704 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sptlc1O35704 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sptlc1O35704 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sptlc1O35704 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sptlc1O35704 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.59■□□□□ 0.89
Sptlc1O35704 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.59■□□□□ 0.89
Sptlc1O35704 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sptlc1O35704 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.58■□□□□ 0.89
Sptlc1O35704 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sptlc1O35704 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sptlc1O35704 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sptlc1O35704 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.58■□□□□ 0.89
Sptlc1O35704 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.58■□□□□ 0.89
Sptlc1O35704 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sptlc1O35704 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sptlc1O35704 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sptlc1O35704 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sptlc1O35704 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sptlc1O35704 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sptlc1O35704 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Sptlc1O35704 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sptlc1O35704 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sptlc1O35704 Gm2559-201ENSMUST00000201323 363 ntBASIC20.57■□□□□ 0.88
Sptlc1O35704 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sptlc1O35704 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sptlc1O35704 Dio3-201ENSMUST00000097228 1449 ntBASIC20.57■□□□□ 0.88
Sptlc1O35704 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Sptlc1O35704 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sptlc1O35704 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.56■□□□□ 0.88
Sptlc1O35704 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sptlc1O35704 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.56■□□□□ 0.88
Sptlc1O35704 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Sptlc1O35704 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sptlc1O35704 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.55■□□□□ 0.88
Sptlc1O35704 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.55■□□□□ 0.88
Sptlc1O35704 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Sptlc1O35704 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.55■□□□□ 0.88
Sptlc1O35704 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sptlc1O35704 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sptlc1O35704 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sptlc1O35704 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sptlc1O35704 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.54■□□□□ 0.88
Sptlc1O35704 Gm44549-201ENSMUST00000208351 577 ntBASIC20.54■□□□□ 0.88
Sptlc1O35704 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Sptlc1O35704 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sptlc1O35704 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sptlc1O35704 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sptlc1O35704 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.53■□□□□ 0.88
Sptlc1O35704 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.53■□□□□ 0.88
Sptlc1O35704 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Gm5643-201ENSMUST00000117081 966 ntBASIC20.53■□□□□ 0.88
Sptlc1O35704 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.53■□□□□ 0.88
Sptlc1O35704 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sptlc1O35704 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
Sptlc1O35704 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms