Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abca4O35600 Gm27704-201ENSMUST00000185094 107 ntBASIC17.82■□□□□ 0.44
Abca4O35600 Mzt1-203ENSMUST00000227948 952 ntBASIC17.82■□□□□ 0.44
Abca4O35600 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Abca4O35600 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Abca4O35600 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abca4O35600 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abca4O35600 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abca4O35600 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abca4O35600 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abca4O35600 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Abca4O35600 Gm17807-201ENSMUST00000186869 298 ntBASIC17.81■□□□□ 0.44
Abca4O35600 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abca4O35600 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abca4O35600 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Abca4O35600 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abca4O35600 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abca4O35600 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abca4O35600 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abca4O35600 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abca4O35600 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Abca4O35600 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abca4O35600 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.8■□□□□ 0.44
Abca4O35600 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abca4O35600 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Abca4O35600 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abca4O35600 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abca4O35600 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abca4O35600 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Abca4O35600 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Abca4O35600 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abca4O35600 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Abca4O35600 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Abca4O35600 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abca4O35600 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abca4O35600 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abca4O35600 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.78■□□□□ 0.44
Abca4O35600 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abca4O35600 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Abca4O35600 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Abca4O35600 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Abca4O35600 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.77■□□□□ 0.44
Abca4O35600 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.77■□□□□ 0.44
Abca4O35600 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abca4O35600 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.77■□□□□ 0.43
Abca4O35600 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.77■□□□□ 0.43
Abca4O35600 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.77■□□□□ 0.43
Abca4O35600 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Abca4O35600 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Abca4O35600 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Gm11927-201ENSMUST00000118472 759 ntBASIC17.76■□□□□ 0.43
Abca4O35600 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.76■□□□□ 0.43
Abca4O35600 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Flg-201ENSMUST00000050758 1488 ntBASIC17.76■□□□□ 0.43
Abca4O35600 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.76■□□□□ 0.43
Abca4O35600 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abca4O35600 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abca4O35600 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Abca4O35600 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abca4O35600 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Abca4O35600 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abca4O35600 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abca4O35600 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abca4O35600 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.75■□□□□ 0.43
Abca4O35600 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.75■□□□□ 0.43
Abca4O35600 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Abca4O35600 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.74■□□□□ 0.43
Abca4O35600 Gm42545-201ENSMUST00000202755 922 ntBASIC17.74■□□□□ 0.43
Abca4O35600 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Abca4O35600 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Abca4O35600 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abca4O35600 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms