Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm9847-201ENSMUST00000052528 599 ntBASIC19.25■□□□□ 0.67
Trove2O08848 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Trove2O08848 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trove2O08848 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trove2O08848 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trove2O08848 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trove2O08848 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trove2O08848 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trove2O08848 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trove2O08848 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trove2O08848 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trove2O08848 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trove2O08848 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trove2O08848 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trove2O08848 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trove2O08848 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trove2O08848 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trove2O08848 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.23■□□□□ 0.67
Trove2O08848 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trove2O08848 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Trove2O08848 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trove2O08848 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.23■□□□□ 0.67
Trove2O08848 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trove2O08848 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trove2O08848 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trove2O08848 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Trove2O08848 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.22■□□□□ 0.67
Trove2O08848 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.22■□□□□ 0.67
Trove2O08848 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.22■□□□□ 0.67
Trove2O08848 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trove2O08848 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trove2O08848 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.21■□□□□ 0.67
Trove2O08848 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trove2O08848 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.21■□□□□ 0.67
Trove2O08848 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.21■□□□□ 0.67
Trove2O08848 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Trove2O08848 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trove2O08848 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trove2O08848 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.2■□□□□ 0.66
Trove2O08848 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.2■□□□□ 0.66
Trove2O08848 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Trove2O08848 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Trove2O08848 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trove2O08848 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.19■□□□□ 0.66
Trove2O08848 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.19■□□□□ 0.66
Trove2O08848 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.19■□□□□ 0.66
Trove2O08848 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.19■□□□□ 0.66
Trove2O08848 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.19■□□□□ 0.66
Trove2O08848 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Trove2O08848 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trove2O08848 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms