Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Casp6O08738 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.19■□□□□ 0.18
Casp6O08738 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Casp6O08738 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Casp6O08738 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Casp6O08738 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
Casp6O08738 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Casp6O08738 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.19■□□□□ 0.18
Casp6O08738 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.19■□□□□ 0.18
Casp6O08738 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Casp6O08738 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Casp6O08738 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Casp6O08738 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Casp6O08738 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.18■□□□□ 0.18
Casp6O08738 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Casp6O08738 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.18■□□□□ 0.18
Casp6O08738 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Casp6O08738 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Casp6O08738 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Casp6O08738 Gm12896-201ENSMUST00000118430 226 ntBASIC16.18■□□□□ 0.18
Casp6O08738 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Casp6O08738 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Casp6O08738 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.18■□□□□ 0.18
Casp6O08738 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Casp6O08738 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.18■□□□□ 0.18
Casp6O08738 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Casp6O08738 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.18■□□□□ 0.18
Casp6O08738 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Casp6O08738 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Casp6O08738 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.17■□□□□ 0.18
Casp6O08738 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Casp6O08738 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Casp6O08738 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Casp6O08738 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.17■□□□□ 0.18
Casp6O08738 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.17■□□□□ 0.18
Casp6O08738 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Casp6O08738 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Casp6O08738 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Casp6O08738 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Casp6O08738 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Casp6O08738 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.16■□□□□ 0.18
Casp6O08738 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Casp6O08738 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.16■□□□□ 0.18
Casp6O08738 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Casp6O08738 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Casp6O08738 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.16■□□□□ 0.18
Casp6O08738 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.15■□□□□ 0.18
Casp6O08738 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Casp6O08738 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Casp6O08738 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Casp6O08738 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Casp6O08738 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Casp6O08738 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Casp6O08738 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.14■□□□□ 0.17
Casp6O08738 Mir6982-201ENSMUST00000184354 68 ntBASIC16.14■□□□□ 0.17
Casp6O08738 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.14■□□□□ 0.17
Casp6O08738 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Casp6O08738 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.14■□□□□ 0.17
Casp6O08738 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Casp6O08738 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Casp6O08738 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Casp6O08738 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.13■□□□□ 0.17
Casp6O08738 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Casp6O08738 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Casp6O08738 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Casp6O08738 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Casp6O08738 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Casp6O08738 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Casp6O08738 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Casp6O08738 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Casp6O08738 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.13■□□□□ 0.17
Casp6O08738 Gm6576-201ENSMUST00000169678 883 ntBASIC16.13■□□□□ 0.17
Casp6O08738 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.13■□□□□ 0.17
Casp6O08738 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.13■□□□□ 0.17
Casp6O08738 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Casp6O08738 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Casp6O08738 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms