Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
B020004C17RikJ3QP07 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
B020004C17RikJ3QP07 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
B020004C17RikJ3QP07 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
B020004C17RikJ3QP07 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.2■□□□□ 0.98
B020004C17RikJ3QP07 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.2■□□□□ 0.98
B020004C17RikJ3QP07 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
B020004C17RikJ3QP07 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
B020004C17RikJ3QP07 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
B020004C17RikJ3QP07 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.2■□□□□ 0.98
B020004C17RikJ3QP07 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Gm11927-201ENSMUST00000118472 759 ntBASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
B020004C17RikJ3QP07 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
B020004C17RikJ3QP07 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
B020004C17RikJ3QP07 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
B020004C17RikJ3QP07 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
B020004C17RikJ3QP07 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
B020004C17RikJ3QP07 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
B020004C17RikJ3QP07 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
B020004C17RikJ3QP07 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.18■□□□□ 0.98
B020004C17RikJ3QP07 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
B020004C17RikJ3QP07 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
B020004C17RikJ3QP07 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
B020004C17RikJ3QP07 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
B020004C17RikJ3QP07 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
B020004C17RikJ3QP07 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
B020004C17RikJ3QP07 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
B020004C17RikJ3QP07 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
B020004C17RikJ3QP07 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.16■□□□□ 0.98
B020004C17RikJ3QP07 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.16■□□□□ 0.98
B020004C17RikJ3QP07 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
B020004C17RikJ3QP07 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
B020004C17RikJ3QP07 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
B020004C17RikJ3QP07 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.15■□□□□ 0.98
B020004C17RikJ3QP07 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
B020004C17RikJ3QP07 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
B020004C17RikJ3QP07 Mir5122-201ENSMUST00000175004 89 ntBASIC21.15■□□□□ 0.98
B020004C17RikJ3QP07 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.15■□□□□ 0.98
B020004C17RikJ3QP07 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
B020004C17RikJ3QP07 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
B020004C17RikJ3QP07 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
B020004C17RikJ3QP07 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
B020004C17RikJ3QP07 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
B020004C17RikJ3QP07 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
B020004C17RikJ3QP07 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
B020004C17RikJ3QP07 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
B020004C17RikJ3QP07 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
B020004C17RikJ3QP07 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.14■□□□□ 0.97
B020004C17RikJ3QP07 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.14■□□□□ 0.97
B020004C17RikJ3QP07 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
B020004C17RikJ3QP07 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
B020004C17RikJ3QP07 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
B020004C17RikJ3QP07 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
B020004C17RikJ3QP07 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
B020004C17RikJ3QP07 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
B020004C17RikJ3QP07 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
B020004C17RikJ3QP07 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
B020004C17RikJ3QP07 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
B020004C17RikJ3QP07 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
B020004C17RikJ3QP07 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
B020004C17RikJ3QP07 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
B020004C17RikJ3QP07 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
B020004C17RikJ3QP07 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
B020004C17RikJ3QP07 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
B020004C17RikJ3QP07 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.12■□□□□ 0.97
B020004C17RikJ3QP07 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms