Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3139J3QK78 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3139J3QK78 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3139J3QK78 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Gm3139J3QK78 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3139J3QK78 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3139J3QK78 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3139J3QK78 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.77■□□□□ 0.6
Gm3139J3QK78 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3139J3QK78 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3139J3QK78 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3139J3QK78 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3139J3QK78 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3139J3QK78 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3139J3QK78 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3139J3QK78 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Gm6211-202ENSMUST00000167849 925 ntBASIC18.76■□□□□ 0.59
Gm3139J3QK78 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm3139J3QK78 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3139J3QK78 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3139J3QK78 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3139J3QK78 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gm3139J3QK78 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gm3139J3QK78 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3139J3QK78 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3139J3QK78 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3139J3QK78 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3139J3QK78 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm3139J3QK78 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3139J3QK78 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm3139J3QK78 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3139J3QK78 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3139J3QK78 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3139J3QK78 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Gm3139J3QK78 Gm13148-201ENSMUST00000118892 745 ntBASIC18.74■□□□□ 0.59
Gm3139J3QK78 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.74■□□□□ 0.59
Gm3139J3QK78 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.74■□□□□ 0.59
Gm3139J3QK78 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.74■□□□□ 0.59
Gm3139J3QK78 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.74■□□□□ 0.59
Gm3139J3QK78 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm3139J3QK78 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.74■□□□□ 0.59
Gm3139J3QK78 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3139J3QK78 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm3139J3QK78 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm3139J3QK78 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3139J3QK78 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3139J3QK78 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3139J3QK78 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.73■□□□□ 0.59
Gm3139J3QK78 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm3139J3QK78 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3139J3QK78 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3139J3QK78 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3139J3QK78 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm3139J3QK78 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3139J3QK78 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3139J3QK78 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3139J3QK78 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3139J3QK78 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm3139J3QK78 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3139J3QK78 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3139J3QK78 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3139J3QK78 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3139J3QK78 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3139J3QK78 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gm3139J3QK78 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.71■□□□□ 0.59
Gm3139J3QK78 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3139J3QK78 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gm3139J3QK78 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Gm3139J3QK78 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3139J3QK78 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3139J3QK78 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms