Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Gm21956-201ENSMUST00000179946 522 ntBASIC16.35■□□□□ 0.21
Cldn20G5E8X0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.35■□□□□ 0.21
Cldn20G5E8X0 Gm13241-201ENSMUST00000094493 780 ntBASIC16.35■□□□□ 0.21
Cldn20G5E8X0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn20G5E8X0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn20G5E8X0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn20G5E8X0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn20G5E8X0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.35■□□□□ 0.21
Cldn20G5E8X0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn20G5E8X0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn20G5E8X0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cldn20G5E8X0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn20G5E8X0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn20G5E8X0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn20G5E8X0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.33■□□□□ 0.21
Cldn20G5E8X0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn20G5E8X0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn20G5E8X0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn20G5E8X0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.33■□□□□ 0.2
Cldn20G5E8X0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.33■□□□□ 0.2
Cldn20G5E8X0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn20G5E8X0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn20G5E8X0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cldn20G5E8X0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn20G5E8X0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms