Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chrna9G3X8Z7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chrna9G3X8Z7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna9G3X8Z7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna9G3X8Z7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna9G3X8Z7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna9G3X8Z7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna9G3X8Z7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna9G3X8Z7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna9G3X8Z7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna9G3X8Z7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.33■□□□□ 0.84
Chrna9G3X8Z7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna9G3X8Z7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna9G3X8Z7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna9G3X8Z7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.3■□□□□ 0.84
Chrna9G3X8Z7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna9G3X8Z7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.3■□□□□ 0.84
Chrna9G3X8Z7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna9G3X8Z7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.3■□□□□ 0.84
Chrna9G3X8Z7 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.3■□□□□ 0.84
Chrna9G3X8Z7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Chrna9G3X8Z7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna9G3X8Z7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna9G3X8Z7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Gm43060-201ENSMUST00000200621 289 ntBASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna9G3X8Z7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna9G3X8Z7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Chrna9G3X8Z7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.28■□□□□ 0.84
Chrna9G3X8Z7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna9G3X8Z7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.28■□□□□ 0.84
Chrna9G3X8Z7 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.28■□□□□ 0.84
Chrna9G3X8Z7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chrna9G3X8Z7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna9G3X8Z7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.27■□□□□ 0.84
Chrna9G3X8Z7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna9G3X8Z7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna9G3X8Z7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna9G3X8Z7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.26■□□□□ 0.83
Chrna9G3X8Z7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.26■□□□□ 0.83
Chrna9G3X8Z7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna9G3X8Z7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna9G3X8Z7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna9G3X8Z7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna9G3X8Z7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna9G3X8Z7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna9G3X8Z7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna9G3X8Z7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms