Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf6F6VAN0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf6F6VAN0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atf6F6VAN0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Atf6F6VAN0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.31■□□□□ 0.68
Atf6F6VAN0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.3■□□□□ 0.68
Atf6F6VAN0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6F6VAN0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.3■□□□□ 0.68
Atf6F6VAN0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atf6F6VAN0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atf6F6VAN0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.28■□□□□ 0.68
Atf6F6VAN0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.28■□□□□ 0.68
Atf6F6VAN0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atf6F6VAN0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atf6F6VAN0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf6F6VAN0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf6F6VAN0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atf6F6VAN0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atf6F6VAN0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atf6F6VAN0 Gm9988-201ENSMUST00000069786 435 ntBASIC19.27■□□□□ 0.68
Atf6F6VAN0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.27■□□□□ 0.68
Atf6F6VAN0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atf6F6VAN0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atf6F6VAN0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf6F6VAN0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.26■□□□□ 0.67
Atf6F6VAN0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.26■□□□□ 0.67
Atf6F6VAN0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Atf6F6VAN0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms