Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Gm18669-201ENSMUST00000216049 778 ntBASIC9.23□□□□□ -0.93
Rnf213E9Q555 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rnf213E9Q555 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Gm24589-201ENSMUST00000116692 94 ntBASIC9.22□□□□□ -0.93
Rnf213E9Q555 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC9.22□□□□□ -0.93
Rnf213E9Q555 AC156016.1-201ENSMUST00000227190 1035 ntBASIC9.22□□□□□ -0.93
Rnf213E9Q555 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC9.22□□□□□ -0.93
Rnf213E9Q555 AC154266.1-201ENSMUST00000223190 503 ntBASIC9.22□□□□□ -0.93
Rnf213E9Q555 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Rnf213E9Q555 Cdkn3-203ENSMUST00000227149 1952 ntBASIC9.22□□□□□ -0.93
Rnf213E9Q555 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC9.21□□□□□ -0.93
Rnf213E9Q555 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
Rnf213E9Q555 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
Rnf213E9Q555 Mtag2-201ENSMUST00000058665 714 ntBASIC9.21□□□□□ -0.93
Rnf213E9Q555 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rnf213E9Q555 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC9.21□□□□□ -0.93
Rnf213E9Q555 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Rnf213E9Q555 Gm17661-201ENSMUST00000170317 270 ntBASIC9.21□□□□□ -0.93
Rnf213E9Q555 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Rnf213E9Q555 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Rnf213E9Q555 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rnf213E9Q555 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC9.21□□□□□ -0.94
Rnf213E9Q555 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rnf213E9Q555 Il17rd-202ENSMUST00000223942 2186 ntBASIC9.21□□□□□ -0.94
Rnf213E9Q555 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC9.21□□□□□ -0.94
Rnf213E9Q555 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Rnf213E9Q555 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rnf213E9Q555 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.2□□□□□ -0.94
Rnf213E9Q555 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Flg-201ENSMUST00000050758 1488 ntBASIC9.2□□□□□ -0.94
Rnf213E9Q555 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Rnf213E9Q555 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Gm37292-201ENSMUST00000192062 758 ntBASIC9.19□□□□□ -0.94
Rnf213E9Q555 AC154621.1-201ENSMUST00000226155 1119 ntBASIC9.19□□□□□ -0.94
Rnf213E9Q555 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Gm19094-201ENSMUST00000209791 1246 ntBASIC9.19□□□□□ -0.94
Rnf213E9Q555 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rnf213E9Q555 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms