Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh17E9PXF0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Pcdh17E9PXF0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdh17E9PXF0 Gm12527-201ENSMUST00000117967 564 ntBASIC17.44■□□□□ 0.38
Pcdh17E9PXF0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh17E9PXF0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh17E9PXF0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh17E9PXF0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.44■□□□□ 0.38
Pcdh17E9PXF0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh17E9PXF0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh17E9PXF0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh17E9PXF0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh17E9PXF0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Gm20760-201ENSMUST00000179197 648 ntBASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdh17E9PXF0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdh17E9PXF0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.38
Pcdh17E9PXF0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdh17E9PXF0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms