Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm24589-201ENSMUST00000116692 94 ntBASIC19.1■□□□□ 0.65
Col6a3E9PWQ3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.1■□□□□ 0.65
Col6a3E9PWQ3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col6a3E9PWQ3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col6a3E9PWQ3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.1■□□□□ 0.65
Col6a3E9PWQ3 Gm27704-201ENSMUST00000185094 107 ntBASIC19.09■□□□□ 0.65
Col6a3E9PWQ3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.09■□□□□ 0.65
Col6a3E9PWQ3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col6a3E9PWQ3 Gm18115-201ENSMUST00000221209 621 ntBASIC19.09■□□□□ 0.65
Col6a3E9PWQ3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col6a3E9PWQ3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.09■□□□□ 0.65
Col6a3E9PWQ3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col6a3E9PWQ3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col6a3E9PWQ3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col6a3E9PWQ3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col6a3E9PWQ3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col6a3E9PWQ3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.08■□□□□ 0.65
Col6a3E9PWQ3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col6a3E9PWQ3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col6a3E9PWQ3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col6a3E9PWQ3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Col6a3E9PWQ3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col6a3E9PWQ3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col6a3E9PWQ3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a3E9PWQ3 Gm22697-201ENSMUST00000175194 63 ntBASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a3E9PWQ3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Gm34391-201ENSMUST00000203706 907 ntBASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col6a3E9PWQ3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a3E9PWQ3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a3E9PWQ3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a3E9PWQ3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a3E9PWQ3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a3E9PWQ3 Gm12382-201ENSMUST00000122005 922 ntBASIC19.04■□□□□ 0.64
Col6a3E9PWQ3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Col6a3E9PWQ3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col6a3E9PWQ3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a3E9PWQ3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a3E9PWQ3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a3E9PWQ3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a3E9PWQ3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a3E9PWQ3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a3E9PWQ3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.02■□□□□ 0.64
Col6a3E9PWQ3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a3E9PWQ3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Col6a3E9PWQ3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col6a3E9PWQ3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a3E9PWQ3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms