Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28043E0CXC2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28043E0CXC2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Gm6139-201ENSMUST00000079261 882 ntBASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28043E0CXC2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Gm8493-201ENSMUST00000196881 489 ntBASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Gm43173-201ENSMUST00000202246 593 ntBASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Gm28043E0CXC2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28043E0CXC2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm28043E0CXC2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.59
Gm28043E0CXC2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Gm28043E0CXC2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm28043E0CXC2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm28043E0CXC2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28043E0CXC2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28043E0CXC2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28043E0CXC2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.75■□□□□ 0.59
Gm28043E0CXC2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28043E0CXC2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Gm28043E0CXC2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Gm28043E0CXC2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Gm28043E0CXC2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28043E0CXC2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms