Protein–RNA interactions for Protein: B2RXC1

Trappc11, Trafficking protein particle complex subunit 11, mousemouse

Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc11B2RXC1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Gm10849-201ENSMUST00000100397 618 ntBASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 AV356131-201ENSMUST00000206201 750 ntBASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.71■□□□□ 0.91
Trappc11B2RXC1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trappc11B2RXC1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trappc11B2RXC1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trappc11B2RXC1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trappc11B2RXC1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Gm7514-201ENSMUST00000209475 934 ntBASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trappc11B2RXC1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.66■□□□□ 0.9
Trappc11B2RXC1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trappc11B2RXC1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc11B2RXC1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc11B2RXC1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc11B2RXC1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc11B2RXC1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.65■□□□□ 0.9
Trappc11B2RXC1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc11B2RXC1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.65■□□□□ 0.9
Trappc11B2RXC1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc11B2RXC1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trappc11B2RXC1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms