Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm7514-201ENSMUST00000209475 934 ntBASIC18.87■□□□□ 0.61
Rrn3B2RS91 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.87■□□□□ 0.61
Rrn3B2RS91 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rrn3B2RS91 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrn3B2RS91 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrn3B2RS91 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrn3B2RS91 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rrn3B2RS91 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrn3B2RS91 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrn3B2RS91 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrn3B2RS91 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrn3B2RS91 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rrn3B2RS91 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.86■□□□□ 0.61
Rrn3B2RS91 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrn3B2RS91 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.85■□□□□ 0.61
Rrn3B2RS91 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrn3B2RS91 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.84■□□□□ 0.61
Rrn3B2RS91 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrn3B2RS91 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.84■□□□□ 0.61
Rrn3B2RS91 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.84■□□□□ 0.61
Rrn3B2RS91 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrn3B2RS91 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rrn3B2RS91 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rrn3B2RS91 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rrn3B2RS91 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rrn3B2RS91 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.83■□□□□ 0.6
Rrn3B2RS91 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.83■□□□□ 0.6
Rrn3B2RS91 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rrn3B2RS91 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rrn3B2RS91 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rrn3B2RS91 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rrn3B2RS91 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rrn3B2RS91 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rrn3B2RS91 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrn3B2RS91 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Rrn3B2RS91 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rrn3B2RS91 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrn3B2RS91 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rrn3B2RS91 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rrn3B2RS91 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rrn3B2RS91 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.81■□□□□ 0.6
Rrn3B2RS91 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rrn3B2RS91 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrn3B2RS91 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrn3B2RS91 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Gm13534-201ENSMUST00000121169 513 ntBASIC18.8■□□□□ 0.6
Rrn3B2RS91 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rrn3B2RS91 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rrn3B2RS91 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rrn3B2RS91 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rrn3B2RS91 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms