Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a5A6H584 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a5A6H584 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a5A6H584 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a5A6H584 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Col6a5A6H584 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Col6a5A6H584 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.33□□□□□ -0.11
Col6a5A6H584 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.33□□□□□ -0.11
Col6a5A6H584 Gm3375-201ENSMUST00000203929 796 ntBASIC14.33□□□□□ -0.11
Col6a5A6H584 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.33□□□□□ -0.11
Col6a5A6H584 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a5A6H584 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a5A6H584 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a5A6H584 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a5A6H584 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a5A6H584 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a5A6H584 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a5A6H584 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a5A6H584 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Col6a5A6H584 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.32□□□□□ -0.12
Col6a5A6H584 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col6a5A6H584 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.32□□□□□ -0.12
Col6a5A6H584 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a5A6H584 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.31□□□□□ -0.12
Col6a5A6H584 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.31□□□□□ -0.12
Col6a5A6H584 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.31□□□□□ -0.12
Col6a5A6H584 Gm6443-201ENSMUST00000203599 874 ntBASIC14.31□□□□□ -0.12
Col6a5A6H584 Mzt1-203ENSMUST00000227948 952 ntBASIC14.31□□□□□ -0.12
Col6a5A6H584 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a5A6H584 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a5A6H584 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.31□□□□□ -0.12
Col6a5A6H584 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a5A6H584 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a5A6H584 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a5A6H584 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a5A6H584 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a5A6H584 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a5A6H584 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a5A6H584 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a5A6H584 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col6a5A6H584 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col6a5A6H584 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Col6a5A6H584 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Col6a5A6H584 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Gm43183-201ENSMUST00000200632 547 ntBASIC14.3□□□□□ -0.12
Col6a5A6H584 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.3□□□□□ -0.12
Col6a5A6H584 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a5A6H584 Gm17807-201ENSMUST00000186869 298 ntBASIC14.29□□□□□ -0.12
Col6a5A6H584 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a5A6H584 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a5A6H584 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a5A6H584 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a5A6H584 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a5A6H584 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a5A6H584 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col6a5A6H584 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.29□□□□□ -0.12
Col6a5A6H584 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.29□□□□□ -0.12
Col6a5A6H584 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a5A6H584 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.28□□□□□ -0.12
Col6a5A6H584 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.28□□□□□ -0.12
Col6a5A6H584 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a5A6H584 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col6a5A6H584 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.28□□□□□ -0.12
Col6a5A6H584 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a5A6H584 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a5A6H584 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a5A6H584 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a5A6H584 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a5A6H584 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a5A6H584 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col6a5A6H584 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a5A6H584 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a5A6H584 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a5A6H584 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms