Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Chd6A3KFM7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Gm18669-201ENSMUST00000216049 778 ntBASIC15.45■□□□□ 0.06
Chd6A3KFM7 Timm23-208ENSMUST00000226683 750 ntBASIC15.45■□□□□ 0.06
Chd6A3KFM7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chd6A3KFM7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd6A3KFM7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.44■□□□□ 0.06
Chd6A3KFM7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Chd6A3KFM7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chd6A3KFM7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd6A3KFM7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chd6A3KFM7 Gm25016-201ENSMUST00000158399 131 ntBASIC15.44■□□□□ 0.06
Chd6A3KFM7 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.44■□□□□ 0.06
Chd6A3KFM7 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.44■□□□□ 0.06
Chd6A3KFM7 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.44■□□□□ 0.06
Chd6A3KFM7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd6A3KFM7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Chd6A3KFM7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd6A3KFM7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.43■□□□□ 0.06
Chd6A3KFM7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd6A3KFM7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chd6A3KFM7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.43■□□□□ 0.06
Chd6A3KFM7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd6A3KFM7 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.43■□□□□ 0.06
Chd6A3KFM7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Chd6A3KFM7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Chd6A3KFM7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Gm22697-201ENSMUST00000175194 63 ntBASIC15.42■□□□□ 0.06
Chd6A3KFM7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Gm12382-201ENSMUST00000122005 922 ntBASIC15.42■□□□□ 0.06
Chd6A3KFM7 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.42■□□□□ 0.06
Chd6A3KFM7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd6A3KFM7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd6A3KFM7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd6A3KFM7 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.41■□□□□ 0.06
Chd6A3KFM7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.41■□□□□ 0.06
Chd6A3KFM7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd6A3KFM7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd6A3KFM7 Gm27704-201ENSMUST00000185094 107 ntBASIC15.41■□□□□ 0.06
Chd6A3KFM7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd6A3KFM7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd6A3KFM7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd6A3KFM7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chd6A3KFM7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd6A3KFM7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd6A3KFM7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd6A3KFM7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd6A3KFM7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd6A3KFM7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd6A3KFM7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd6A3KFM7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd6A3KFM7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chd6A3KFM7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd6A3KFM7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd6A3KFM7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Gm18115-201ENSMUST00000221209 621 ntBASIC15.39■□□□□ 0.05
Chd6A3KFM7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd6A3KFM7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd6A3KFM7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd6A3KFM7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd6A3KFM7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd6A3KFM7 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.38■□□□□ 0.05
Chd6A3KFM7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd6A3KFM7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chd6A3KFM7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd6A3KFM7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd6A3KFM7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd6A3KFM7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Gm27525-201ENSMUST00000184465 107 ntBASIC15.37■□□□□ 0.05
Chd6A3KFM7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.37■□□□□ 0.05
Chd6A3KFM7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Gm24589-201ENSMUST00000116692 94 ntBASIC15.37■□□□□ 0.05
Chd6A3KFM7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd6A3KFM7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.37■□□□□ 0.05
Chd6A3KFM7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms