Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav12-1A0N8R1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav12-1A0N8R1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav12-1A0N8R1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Trav12-1A0N8R1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12-1A0N8R1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Trav12-1A0N8R1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12-1A0N8R1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Gm12251-201ENSMUST00000117893 792 ntBASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav12-1A0N8R1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12-1A0N8R1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms