Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv1-88A0A140T8N1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Igkv1-88A0A140T8N1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Igkv1-88A0A140T8N1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Igkv1-88A0A140T8N1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
Igkv1-88A0A140T8N1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Igkv1-88A0A140T8N1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Igkv1-88A0A140T8N1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm15546-201ENSMUST00000122095 826 ntBASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Igkv1-88A0A140T8N1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Igkv1-88A0A140T8N1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms