Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Cfap99A0A140LIX9 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.46■■□□□ 1.19
Cfap99A0A140LIX9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.46■■□□□ 1.19
Cfap99A0A140LIX9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cfap99A0A140LIX9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cfap99A0A140LIX9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cfap99A0A140LIX9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC22.45■■□□□ 1.18
Cfap99A0A140LIX9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cfap99A0A140LIX9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Cfap99A0A140LIX9 Gm6420-201ENSMUST00000193885 723 ntBASIC22.45■■□□□ 1.18
Cfap99A0A140LIX9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
Cfap99A0A140LIX9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cfap99A0A140LIX9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cfap99A0A140LIX9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.44■■□□□ 1.18
Cfap99A0A140LIX9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.44■■□□□ 1.18
Cfap99A0A140LIX9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.44■■□□□ 1.18
Cfap99A0A140LIX9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cfap99A0A140LIX9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.44■■□□□ 1.18
Cfap99A0A140LIX9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cfap99A0A140LIX9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Cfap99A0A140LIX9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Cfap99A0A140LIX9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cfap99A0A140LIX9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cfap99A0A140LIX9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cfap99A0A140LIX9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
Cfap99A0A140LIX9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.43■■□□□ 1.18
Cfap99A0A140LIX9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cfap99A0A140LIX9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cfap99A0A140LIX9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cfap99A0A140LIX9 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.43■■□□□ 1.18
Cfap99A0A140LIX9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cfap99A0A140LIX9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cfap99A0A140LIX9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Cfap99A0A140LIX9 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.41■■□□□ 1.18
Cfap99A0A140LIX9 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.41■■□□□ 1.18
Cfap99A0A140LIX9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cfap99A0A140LIX9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Cfap99A0A140LIX9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cfap99A0A140LIX9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cfap99A0A140LIX9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cfap99A0A140LIX9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Gm13534-201ENSMUST00000121169 513 ntBASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Cfap99A0A140LIX9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Cfap99A0A140LIX9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cfap99A0A140LIX9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Cfap99A0A140LIX9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cfap99A0A140LIX9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cfap99A0A140LIX9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cfap99A0A140LIX9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cfap99A0A140LIX9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cfap99A0A140LIX9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Cfap99A0A140LIX9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cfap99A0A140LIX9 Gm6211-202ENSMUST00000167849 925 ntBASIC22.37■■□□□ 1.17
Cfap99A0A140LIX9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Cfap99A0A140LIX9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.37■■□□□ 1.17
Cfap99A0A140LIX9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cfap99A0A140LIX9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cfap99A0A140LIX9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms